RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 C20orf96Q9NUD7 363 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 A0A096LPK6 155 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 DPYSL4O14531 572 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 HUS1O60921 280 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 IL1BP01584 269 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 RAG1P15918 1043 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 NUDT2P50583 147 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 LAMC2Q13753 1193 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 PCLAFQ15004 111 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 KYAT1Q16773 422 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 EML3Q32P44 896 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 FSCBQ5H9T9 825 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 C16orf87Q6PH81 154 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 RBM44Q6ZP01 1051 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 PIGZQ86VD9 579 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 RAVER1Q8IY67 606 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 TMCO5AQ8N6Q1 288 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 CXorf38Q8TB03 319 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 SLC7A14Q8TBB6 771 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 RBPJLQ9UBG7 517 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 MORF4L1Q9UBU8 362 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 GABBR2O75899 941 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 RXRGP48443 463 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 FBXO47Q5MNV8 452 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 DHDDSQ86SQ9 333 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 ZNF781Q8N8C0 355 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 ANKRD52Q8NB46 1076 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 APPL2Q8NEU8 664 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 RAB3IL1Q8TBN0 382 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 USP33Q8TEY7 942 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 ZNF778Q96MU6 729 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 TASP1Q9H6P5 420 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 WDR55Q9H6Y2 383 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 COG4Q9H9E3 785 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 EMCNQ9ULC0 261 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 ARHGAP26Q9UNA1 814 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 FAF1Q9UNN5 650 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 CYP2C8P10632 490 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 AVPR1AP37288 418 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 GRIA2P42262 883 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 ZNF362Q5T0B9 420 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 ZNF567Q8N184 647 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 PLD6Q8N2A8 252 aaKnown RBP16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 OR6Y1Q8NGX8 325 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 PPP2R3CQ969Q6 453 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 HAPLN3Q96S86 360 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 NXF3Q9H4D5 531 aaKnown RBP16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 PLA2G4CQ9UP65 541 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 TRIP11Q15643 1979 aa16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 ZNF646O15015 1829 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-201ENST00000335793 FZD9O00144 591 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 AOC1P19801 751 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 TCN1P20061 433 aaPredicted RBP16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 NDUFV1P49821 464 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 KLC3Q6P597 504 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 SLC26A9Q7LBE3 791 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 KDELC2Q7Z4H8 507 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 ZDHHC17Q8IUH5 632 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 CCNYL1Q8N7R7 359 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 ACMSDQ8TDX5 336 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 MFSD3Q96ES6 412 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 DNAI2Q9GZS0 605 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 MTMR10Q9NXD2 777 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 CDH22Q9UJ99 828 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 PIN4Q9Y237 131 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 CDY2AQ9Y6F7 541 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 CDY1Q9Y6F8 540 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 ASB14A6NK59 587 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 RECQL4O94761 1208 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 ENO3P13929 434 aaPredicted RBP16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 PEX2P28328 305 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 PTPN9P43378 593 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 DMPKQ09013 629 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 FRMD7Q6ZUT3 714 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 SLC7A5P1Q8MH63 180 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 IARS2Q9NSE4 1012 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 VANGL2Q9ULK5 521 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 SORCS3Q9UPU3 1222 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 STAMBPO95630 424 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 CYLC2Q14093 348 aaPredicted RBP16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 GRIK4Q16099 956 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 CMPK2Q5EBM0 449 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 TMEM214Q6NUQ4 689 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 TDRD5Q8NAT2 981 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 ICA1LQ8NDH6 482 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 GCNAQ96QF7 691 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 KLHL4Q9C0H6 718 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 FAM96AQ9H5X1 160 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 LRRC40Q9H9A6 602 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 STAP1Q9ULZ2 295 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 SSX2IPQ9Y2D8 614 aa16.85■□□□□ 0.29
CDC42EP4-201ENST00000335793 KPNA7A9QM74 516 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 XPOTO43592 962 aaKnown RBP16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 CERCAMQ5T4B2 595 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 NAT9Q9BTE0 207 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 HTR3EA5X5Y0 456 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 DDNO94850 711 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 COL6A2P12110 1019 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 EPHA3P29320 983 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms