RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 TMEM216Q9P0N5 145 aa10.98□□□□□ -0.65
CCDC172-201ENST00000333254 SEPT10Q9P0V9 454 aa10.98□□□□□ -0.65
CCDC172-201ENST00000333254 ARMCX1Q9P291 453 aa10.98□□□□□ -0.65
CCDC172-201ENST00000333254 DSEQ9UL01 958 aa10.98□□□□□ -0.65
CCDC172-201ENST00000333254 CORO1CQ9ULV4 474 aaPredicted RBP10.98□□□□□ -0.65
CCDC172-201ENST00000333254 LRCH1Q9Y2L9 728 aa10.98□□□□□ -0.65
CCDC172-201ENST00000333254 DOCK4Q8N1I0 1966 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 ARHGEF37A1IGU5 675 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 C2orf71A6NGG8 1288 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 I6L893 689 aaPredicted RBP10.97□□□□□ -0.65
CCDC172-201ENST00000333254 SLC22A2O15244 555 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 ITM2AO43736 263 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC172-201ENST00000333254 SRGAP2BP0DMP2 458 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 ODC1P11926 461 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 NCAM1P13591 858 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 CPA3P15088 417 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 CCNCP24863 283 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 CPOXP36551 454 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 RGS2P41220 211 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 NRG1Q02297 640 aaPredicted RBP10.97□□□□□ -0.65
CCDC172-201ENST00000333254 MPP3Q13368 585 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 NAA25Q14CX7 972 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 RCN1Q15293 331 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 CCDC6Q16204 474 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 FSCN1Q16658 493 aaKnown RBP10.97□□□□□ -0.65
CCDC172-201ENST00000333254 PDPK2PQ6A1A2 396 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 LRRC74BQ6ZQY2 392 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 MYLK4Q86YV6 388 aaPredicted RBP10.97□□□□□ -0.65
CCDC172-201ENST00000333254 LRRC49Q8IUZ0 686 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 CNTN4Q8IWV2 1026 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 ULK2Q8IYT8 1036 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 NPWQ8N729 165 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 C2orf69Q8N8R5 385 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 RILPQ96NA2 401 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 GPR22Q99680 433 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 APBA2Q99767 749 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 TMPRSS4Q9NRS4 437 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 NMRK1Q9NWW6 199 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 DDIT4Q9NX09 232 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 ARHGEF38Q9NXL2 777 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 FLRT1Q9NZU1 646 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 AAR2Q9Y312 384 aaKnown RBP10.97□□□□□ -0.65
CCDC172-201ENST00000333254 NR2E3Q9Y5X4 410 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 NYNRINQ9P2P1 1898 aaKnown RBP10.97□□□□□ -0.65
CCDC172-201ENST00000333254 FRMPD3Q5JV73 1810 aa10.97□□□□□ -0.65
CCDC172-201ENST00000333254 MYBPHLA2RUH7 354 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 A6NHS1 94 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 PRR5-ARHGAP8B1AHC4 643 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 KCNK1O00180 336 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 FGF10O15520 208 aaPredicted RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ZBTB24O43167 697 aaPredicted RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 CCNT2O60583 730 aaKnown RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 SIN3BO75182 1162 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 DUSP11O75319 330 aaKnown RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ERVK-10P10266 1014 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 NFKB1P19838 968 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ADSLP30566 484 aaPredicted RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 MLH1P40692 756 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 IDH3AP50213 366 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ARHGAP8P85298 464 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ZBTB17Q13105 803 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 LBRQ14739 615 aaKnown RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 MAPRE1Q15691 268 aaKnown RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 UGP2Q16851 508 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 SNX30Q5VWJ9 437 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 FSTL4Q6MZW2 842 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 IRGCQ6NXR0 463 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 C16orf46Q6P387 395 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ZCCHC23Q6ZST2 131 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 STRA8Q7Z7C7 330 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 KCNMB4Q86W47 210 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 C10orf107Q8IVU9 208 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 CCDC33Q8N5R6 958 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 GPATCH11Q8N954 259 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 PPFIBP2Q8ND30 876 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 URGCPQ8TCY9 931 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 WDR60Q8WVS4 1066 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 FATE1Q969F0 183 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ZFP42Q96MM3 310 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 FAM161BQ96MY7 647 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 UROC1Q96N76 676 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 FCRL5Q96RD9 977 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 HAPLN3Q96S86 360 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 PKMYT1Q99640 499 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 EBF4Q9BQW3 602 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 SENP6Q9GZR1 1112 aaPredicted RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 RHOJQ9H4E5 214 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 WDCPQ9H6R7 721 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ZNF395Q9H8N7 513 aaPredicted RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 DMAP1Q9NPF5 467 aaPredicted RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ANLNQ9NQW6 1124 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.96□□□□□ -0.65
CCDC172-201ENST00000333254 NEU3Q9UQ49 428 aa10.96□□□□□ -0.65
CCDC172-201ENST00000333254 ARHGAP42A6NI28 874 aa10.95□□□□□ -0.66
CCDC172-201ENST00000333254 G3V2L1 256 aa10.95□□□□□ -0.66
CCDC172-201ENST00000333254 H0Y3Z8 333 aa10.95□□□□□ -0.66
CCDC172-201ENST00000333254 M0QZQ0 153 aa10.95□□□□□ -0.66
CCDC172-201ENST00000333254 INPPL1O15357 1258 aa10.95□□□□□ -0.66
CCDC172-201ENST00000333254 TRIM13O60858 407 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms