RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TMED10P49755 219 aaKnown RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 BMXP51813 675 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 RPS3AP61247 264 aaKnown RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 GHRHRQ02643 423 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CD300CQ08708 224 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 GALNT2Q10471 571 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 SEMA5AQ13591 1074 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 TRIM25Q14258 630 aaKnown RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 C16orf87Q6PH81 154 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 EEPD1Q7L9B9 569 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 HERC6Q8IVU3 1022 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CNTD1Q8N815 330 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 ISL2Q96A47 359 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 MARK4Q96L34 752 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 ILKAPQ9H0C8 392 aaPredicted RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 PALMDQ9NP74 551 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 PSME4Q14997 1843 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 SOCS2O14508 198 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 AKAP10O43572 662 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 TRIM13O60858 407 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 GNAO1P09471 354 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CKMT2P17540 419 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 TNFSF9P41273 254 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CCR10P46092 362 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 PRAMEP78395 509 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 BNIP3Q12983 259 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 PMS2P3Q13401 168 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 MOGQ16653 247 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 SEL1L3Q68CR1 1132 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 ANKRD26P1Q6NSI1 321 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 PPP4R4Q6NUP7 873 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CASC4Q6P4E1 433 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CHSY3Q70JA7 882 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 WDR49Q8IV35 697 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 BRSK2Q8IWQ3 736 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 ZNF786Q8N393 782 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 ARNTL2Q8WYA1 636 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 DUS3LQ96G46 650 aaKnown RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CNPY3Q9BT09 278 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 NOL11Q9H8H0 719 aaKnown RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 ACSS2Q9NR19 701 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CNOT6Q9ULM6 557 aaKnown RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 RAP2CQ9Y3L5 183 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 PCDHGA7Q9Y5G6 932 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CORINQ9Y5Q5 1042 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 TCRBV3S1A0A5B6 114 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 J3QRK9 145 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 DLGAP1O14490 977 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 GPD1P21695 349 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 SLC7A1P30825 629 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 PTGER2P43116 358 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 TREML2Q5T2D2 321 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 FAM102AQ5T9C2 384 aaPredicted RBP13.02□□□□□ -0.32
CCDC60-201ENST00000327554 GPR107Q5VW38 600 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 TMEM26Q6ZUK4 368 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 CDKL3Q8IVW4 592 aaPredicted RBP13.02□□□□□ -0.32
CCDC60-201ENST00000327554 DCLK2Q8N568 766 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 FBXL8Q96CD0 374 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 NAA50Q9GZZ1 169 aaKnown RBP13.02□□□□□ -0.32
CCDC60-201ENST00000327554 ADA2Q9NZK5 511 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 FEM1BQ9UK73 627 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 TMEM98Q9Y2Y6 226 aa13.02□□□□□ -0.32
CCDC60-201ENST00000327554 C2CD4BA6NLJ0 364 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 KPNA7A9QM74 516 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 PRPSAP2O60256 369 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.33
CCDC60-201ENST00000327554 RPL14P50914 215 aaKnown RBP13.02□□□□□ -0.33
CCDC60-201ENST00000327554 PSME3P61289 254 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 IRF9Q00978 393 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 RAB39AQ14964 217 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 PDK2Q15119 407 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 CA9Q16790 459 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 CDO1Q16878 200 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 EGFLAMQ63HQ2 1017 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 ZBTB49Q6ZSB9 765 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 CLEC14AQ86T13 490 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 TMEM110Q86TL2 294 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 SCAIQ8N9R8 606 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 C17orf50Q8WW18 174 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 RXFP2Q8WXD0 754 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 TOP1MTQ969P6 601 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 VPS33BQ9H267 617 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 TDRD3Q9H7E2 651 aaKnown RBP13.02□□□□□ -0.33
CCDC60-201ENST00000327554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCDC60-201ENST00000327554 SMOXQ9NWM0 555 aa13.02□□□□□ -0.33
CCDC60-201ENST00000327554 PIH1D1Q9NWS0 290 aaKnown RBP13.02□□□□□ -0.33
CCDC60-201ENST00000327554 COPG1Q9Y678 874 aaKnown RBP13.02□□□□□ -0.33
CCDC60-201ENST00000327554 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
CCDC60-201ENST00000327554 E7ENX8 843 aa13.01□□□□□ -0.33
CCDC60-201ENST00000327554 K7ERI5 159 aa13.01□□□□□ -0.33
CCDC60-201ENST00000327554 MED7O43513 233 aa13.01□□□□□ -0.33
CCDC60-201ENST00000327554 MLNP12872 115 aa13.01□□□□□ -0.33
CCDC60-201ENST00000327554 PGAM1P18669 254 aa13.01□□□□□ -0.33
CCDC60-201ENST00000327554 MYF6P23409 242 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms