RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CDH24Q86UP0 819 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 NCKIPSDQ9NZQ3 722 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 BTBD3Q9Y2F9 522 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 CEPT1Q9Y6K0 416 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 TCRBV7S3A2A0A539 114 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 AGRPO00253 132 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 TCEA1P23193 301 aaKnown RBP16.91■□□□□ 0.3
PACS1-201ENST00000320580 ST13P50502 369 aaKnown RBP16.91■□□□□ 0.3
PACS1-201ENST00000320580 TRAF3Q13114 568 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 NFYCQ13952 458 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 DUOXA2Q1HG44 320 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 TMEM179Q6ZVK1 233 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 SLC9A9Q8IVB4 645 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 C8orf59Q8N0T1 100 aaPredicted RBP16.91■□□□□ 0.3
PACS1-201ENST00000320580 ZNF781Q8N8C0 355 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 VTA1Q9NP79 307 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 KANSL1LA0AUZ9 987 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 USP12O75317 370 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 GSTM4Q03013 218 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 TLK2Q86UE8 772 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 RELL1Q8IUW5 271 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 PDPRQ8NCN5 879 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 ELMO1Q92556 727 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 LRRC39Q96DD0 335 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 SLC25A23Q9BV35 468 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 CEP41Q9BYV8 373 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 FAM32AQ9Y421 112 aaKnown RBP16.9■□□□□ 0.3
PACS1-201ENST00000320580 NOMO3P69849 1222 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 PPM1JQ5JR12 505 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 NEK5Q6P3R8 708 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 UNC5AQ6ZN44 842 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 Q6ZNX1 250 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 CDHR3Q6ZTQ4 885 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 SHCBP1Q8NEM2 672 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 UBA3Q8TBC4 463 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 OSCP1Q8WVF1 389 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 ENTPD7Q9NQZ7 604 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 ZNF221Q9UK13 617 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 PABPN1LA6NDY0 278 aaKnown RBP16.9■□□□□ 0.3
PACS1-201ENST00000320580 SUPT7LO94864 414 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 NDUFB10O96000 172 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 ALDH4A1P30038 563 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 MIPP30301 263 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 KCNK10P57789 538 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 PPP4CP60510 307 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 SLC35G1Q2M3R5 365 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 ZFP69Q49AA0 526 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 AZIN2Q96A70 460 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 DHRS1Q96LJ7 313 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 KCNK13Q9HB14 408 aa16.9■□□□□ 0.3
PACS1-201ENST00000320580 NPTX2P47972 431 aa16.89■□□□□ 0.3
PACS1-201ENST00000320580 JAK3P52333 1124 aa16.89■□□□□ 0.3
PACS1-201ENST00000320580 NRLP54845 237 aa16.89■□□□□ 0.3
PACS1-201ENST00000320580 VAC14Q08AM6 782 aa16.89■□□□□ 0.3
PACS1-201ENST00000320580 C4orf22Q6V702 233 aa16.89■□□□□ 0.3
PACS1-201ENST00000320580 OTOP1Q7RTM1 612 aa16.89■□□□□ 0.3
PACS1-201ENST00000320580 PROX1Q92786 737 aa16.89■□□□□ 0.3
PACS1-201ENST00000320580 SNX27Q96L92 541 aa16.89■□□□□ 0.3
PACS1-201ENST00000320580 IARS2Q9NSE4 1012 aaKnown RBP16.89■□□□□ 0.3
PACS1-201ENST00000320580 FBXO9Q9UK97 447 aaPredicted RBP16.89■□□□□ 0.3
PACS1-201ENST00000320580 HNRNPCL2B2RXH8 293 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 FAM25AB3EWG3 89 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 FAM25CB3EWG5 89 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 FAM25GB3EWG6 89 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 E7ENX8 843 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 TIMM44O43615 452 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 PLIN3O60664 434 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 TOP3BO95985 862 aaKnown RBP16.89■□□□□ 0.29
PACS1-201ENST00000320580 NKX2-5P52952 324 aaPredicted RBP16.89■□□□□ 0.29
PACS1-201ENST00000320580 PRKAA2P54646 552 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 SLC18A2Q05940 514 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 IQSEC1Q6DN90 963 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 ZC3H7AQ8IWR0 971 aaKnown RBP16.89■□□□□ 0.29
PACS1-201ENST00000320580 ACMSDQ8TDX5 336 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 UBASH3BQ8TF42 649 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 EBNA1BP2Q99848 306 aaKnown RBP16.89■□□□□ 0.29
PACS1-201ENST00000320580 NAT9Q9BTE0 207 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 TRPV5Q9NQA5 729 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 FAM49BQ9NUQ9 324 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.89■□□□□ 0.29
PACS1-201ENST00000320580 KANSL3Q9P2N6 904 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 TMEM150BA6NC51 233 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 KCNU1A8MYU2 1149 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 MYO1GB0I1T2 1018 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 BUD23O43709 281 aaKnown RBP16.89■□□□□ 0.29
PACS1-201ENST00000320580 EXTL3O43909 919 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 PRDX6P30041 224 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 PTP4A2Q12974 167 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 SMU1Q2TAY7 513 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 TJAP1Q5JTD0 557 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 P3H2Q8IVL5 708 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 TUBGCP3Q96CW5 907 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 APOL2Q9BQE5 337 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 PCDHGC3Q9UN70 934 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 RABL2BQ9UNT1 228 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 TRIM24O15164 1050 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 GRIA4P48058 902 aa16.89■□□□□ 0.29
PACS1-201ENST00000320580 TNFAIP2Q03169 654 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms