RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PKP2Q99959 881 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 NMRAL1Q9HBL8 299 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TMEM247A6NEH6 219 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 UBDO15205 165 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PAPSS1O43252 624 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 CYP1A1P04798 512 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 CYP2B6P20813 491 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 KLRC2P26717 231 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 LRPAP1P30533 357 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SFNP31947 248 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PTPN7P35236 360 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 HADHAP40939 763 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 GJA8P48165 433 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SLC7A2P52569 658 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 GBE1Q04446 702 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 WASHC5Q12768 1159 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 STX5Q13190 355 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 OLIG2Q13516 323 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TSTA3Q13630 321 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 GTF2H3Q13889 308 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PGS1Q32NB8 556 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 MON1BQ7L1V2 547 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 ANKS1BQ7Z6G8 1248 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 HERC6Q8IVU3 1022 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TFB1MQ8WVM0 346 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SKA1Q96BD8 255 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 GPATCH1Q9BRR8 931 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SOX17Q9H6I2 414 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 EPS8L2Q9H6S3 715 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 EXOSC4Q9NPD3 245 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 MRGBPQ9NV56 204 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 LTBP3Q9NS15 1303 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 GON4LQ3T8J9 2241 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PABPN1LA6NDY0 278 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 STMN1P16949 149 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 UGT1A6P19224 532 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 ITGAXP20702 1163 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PSMB4P28070 264 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 ADSSP30520 456 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 GRIA4P48058 902 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 IDH3AP50213 366 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PPP1R8Q12972 351 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 DEFB115Q30KQ5 88 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SGO1Q5FBB7 561 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 RSBN1Q5VWQ0 802 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TATDN1Q6P1N9 297 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 ANGPTL8Q6UXH0 198 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 BBS12Q6ZW61 710 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 DNAJB14Q8TBM8 379 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 KCTD4Q8WVF5 259 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TRAPPC12Q8WVT3 735 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 LZICQ8WZA0 190 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 CD101Q93033 1021 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 GPAMQ9HCL2 828 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TRIM39Q9HCM9 518 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PNMA8BQ9ULN7 279 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 DRG1Q9Y295 367 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 LAMA4Q16363 1823 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 TK2O00142 265 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CCNT2O60583 730 aaKnown RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CCDC159P0C7I6 412 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 IMPDH2P12268 514 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 KCNA2P16389 499 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 GARTP22102 1010 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 IL1R2P27930 398 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 INHBCP55103 352 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 INHBEP58166 350 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 OGDHQ02218 1023 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 SPIRE1Q08AE8 756 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 ADRM1Q16186 407 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 IL23RQ5VWK5 629 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 ATG14Q6ZNE5 492 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 TMEM26Q6ZUK4 368 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 MAP4K3Q8IVH8 894 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 SYTL1Q8IYJ3 562 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CBR4Q8N4T8 237 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 DHRSXQ8N5I4 330 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 PSMA8Q8TAA3 256 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 LPGAT1Q92604 370 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 CXorf21Q9HAI6 301 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 APOBEC3GQ9HC16 384 aaKnown RBP7.66□□□□□ -1.18
CDHR3-201ENST00000317716 ZFYVE28Q9HCC9 887 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 HPS4Q9NQG7 708 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 DMAC2Q9NW81 257 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 FEM1BQ9UK73 627 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 TELO2Q9Y4R8 837 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 MYPNQ86TC9 1320 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 RGSL1A5PLK6 1076 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 RGS5O15539 181 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 JCHAINP01591 159 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 GJB1P08034 283 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 HDCP19113 662 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 UGT1A1P22309 533 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 UGT1A4P22310 534 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 UGT1A3P35503 534 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 UGT1A5P35504 534 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 GP5P40197 560 aa7.66□□□□□ -1.18
CDHR3-201ENST00000317716 BACE1P56817 501 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms