RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 HASPINQ8TF76 798 aa11.11□□□□□ -0.63
PCDHGC4-201ENST00000306593 SPATA17Q96L03 361 aa11.11□□□□□ -0.63
PCDHGC4-201ENST00000306593 SYBUQ9NX95 663 aa11.11□□□□□ -0.63
PCDHGC4-201ENST00000306593 PDP2Q9P2J9 529 aa11.11□□□□□ -0.63
PCDHGC4-201ENST00000306593 SLC30A1Q9Y6M5 507 aa11.11□□□□□ -0.63
PCDHGC4-201ENST00000306593 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 RAMP2O60895 175 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 DUSP11O75319 330 aaKnown RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 SOAT2O75908 522 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 CCNB1P14635 433 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 IL10P22301 178 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 YWHAQP27348 245 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 AVPR1AP37288 418 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 WDR4P57081 412 aaKnown RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 ZNF177Q13360 481 aaPredicted RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 TRIP10Q15642 601 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 POTEHQ6S545 545 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 NET1Q7Z628 596 aaPredicted RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 CLNKQ7Z7G1 428 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 KCTD13Q8WZ19 329 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 NTAN1Q96AB6 310 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 GPAMQ9HCL2 828 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 SLC12A8A0AV02 714 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 CLDN5O00501 218 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 TREHO43280 583 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 TPH1P17752 444 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 IVDP26440 423 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 FLOT2Q14254 428 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 GRB14Q14449 540 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 CNGA3Q16281 694 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 MARK2Q7KZI7 788 aaKnown RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 PTCD2Q8WV60 388 aaKnown RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 SEPT8Q92599 483 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 ASB2Q96Q27 587 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 DPEP3Q9H4B8 488 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 RIC8BQ9NVN3 520 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 IGSF9Q9P2J2 1179 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 PGAP2Q9UHJ9 254 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 ATRXP46100 2492 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 LRRC37AA6NMS7 1700 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 VAPBO95292 243 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 GLP2RO95838 553 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 RECQLP46063 649 aaPredicted RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 MSLNQ13421 630 aaPredicted RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 TUSC3Q13454 348 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 RBBP7Q16576 425 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 TEX44Q53QW1 395 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 LRRC8EQ6NSJ5 796 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 MIB1Q86YT6 1006 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 WDTC1Q8N5D0 677 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 CCDC185Q8N715 623 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 TMA16Q96EY4 203 aaKnown RBP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 PPP1R36Q96LQ0 422 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 RMDN2Q96LZ7 410 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 MUC3BQ9H195 1237 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 AAASQ9NRG9 546 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 RHOBTB1O94844 696 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 AP2A1O95782 977 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 ALDH2P05091 517 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 OXCT1P55809 520 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 CES3Q6UWW8 571 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 KYQ8NBH2 561 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 DCAKDQ8WVC6 231 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 TRIM54Q9BYV2 358 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 RRAGCQ9HB90 399 aa11.1□□□□□ -0.63
PCDHGC4-201ENST00000306593 QSER1Q2KHR3 1735 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 USP12O75317 370 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 SERPINF2P08697 491 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 ALDH1A3P47895 512 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 GLRBP48167 497 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 FOXD4Q12950 439 aaPredicted RBP11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 PDCD2Q16342 344 aaPredicted RBP11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 PPP4R4Q6NUP7 873 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 ZCCHC23Q6ZST2 131 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 ACBD6Q9BR61 282 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 MRPL9Q9BYD2 267 aaKnown RBP11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 GBA3Q9H227 469 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 PIH1D1Q9NWS0 290 aaKnown RBP11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 LRCH1Q9Y2L9 728 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 DNAJC25-GNG10A0A024R161 153 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 SYCE1LA8MT33 242 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 TRAFD1O14545 582 aaPredicted RBP11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 USP1O94782 785 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 FOXN2P32314 431 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 RGS4P49798 205 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 SERPINH1P50454 418 aaKnown RBP11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 RPL14P50914 215 aaKnown RBP11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 CRADDP78560 199 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 IRF5Q13568 498 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 SLC39A12Q504Y0 691 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 ZNF470Q6ECI4 717 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 TMEM154Q6P9G4 183 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 RIN3Q8TB24 985 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 BLOC1S5Q8TDH9 187 aa11.09□□□□□ -0.63
PCDHGC4-201ENST00000306593 ULK4Q96C45 1275 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms