RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 MAGEA8P43361 318 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 DGCR6Q14129 220 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 TSGA10IPQ3SY00 556 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 BOLA3Q53S33 107 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 MFSD7Q6UXD7 560 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 ATG9AQ7Z3C6 839 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 TRMT11Q7Z4G4 463 aaKnown RBP5.65□□□□□ -1.5
CPSF2-201ENST00000298875 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.65□□□□□ -1.5
CPSF2-201ENST00000298875 TRPV1Q8NER1 839 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 REPS1Q96D71 796 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 TARS2Q9BW92 718 aaKnown RBP5.65□□□□□ -1.5
CPSF2-201ENST00000298875 FUT8Q9BYC5 575 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 CEP41Q9BYV8 373 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 CAPN6Q9Y6Q1 641 aa5.65□□□□□ -1.5
CPSF2-201ENST00000298875 CCDC130P13994 396 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CCR4P51679 360 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CHN2P52757 468 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ACAP1Q15027 740 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ATG14Q6ZNE5 492 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 DSG4Q86SJ6 1040 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 TRIM74Q86UV6 250 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 TRIM73Q86UV7 250 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CCDC185Q8N715 623 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 TOR1AIP2Q8NFQ8 470 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ERLEC1Q96DZ1 483 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 C9orf16Q9BUW7 83 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 NUDT5Q9UKK9 219 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ETS1P14921 441 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ACO1P21399 889 aaKnown RBP5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CDC25CP30307 473 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ACOX1Q15067 660 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 TAF1CQ15572 869 aaPredicted RBP5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF112Q9UJU3 913 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 AP3D1O14617 1153 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 BMP10O95393 424 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 PGAM1P18669 254 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 PRKAA2P54646 552 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ERVK-24P63145 666 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 PYDC2Q56P42 97 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ZCCHC23Q6ZST2 131 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 LRRC17Q8N6Y2 441 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CGRRF1Q99675 332 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 NAT9Q9BTE0 207 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 SENP2Q9HC62 589 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 SLC24A2Q9UI40 661 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CROTQ9UKG9 612 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 KCNH1O95259 989 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CYP4F2P78329 520 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CYP4F3Q08477 520 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 TRAP1Q12931 704 aaKnown RBP5.65□□□□□ -1.51
CPSF2-201ENST00000298875 C15orf59Q2T9L4 293 aaPredicted RBP5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ARHGEF19Q8IW93 802 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 NLNQ9BYT8 704 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 EPB41L1Q9H4G0 881 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 GPRC5CQ9NQ84 441 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ANKEF1Q9NU02 776 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 HACL1Q9UJ83 578 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 C2CD2Q9Y426 696 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 DAGLAQ9Y4D2 1042 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 LRRIQ1Q96JM4 1722 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 A0A0G2JLW4 131 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 IRGMA1A4Y4 181 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 ARHGEF33A8MVX0 844 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 SNAP91O60641 907 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 TYMPP19971 482 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CRABP2P29373 138 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CHRNA5P30532 468 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 RPS6KA3P51812 740 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 LGALS3BPQ08380 585 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 BOP1Q14137 746 aaKnown RBP5.65□□□□□ -1.51
CPSF2-201ENST00000298875 LIN54Q6MZP7 749 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 DNAAF5Q86Y56 855 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CENPIQ92674 756 aaPredicted RBP5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CRAMP1Q96RY5 1269 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 CDRT15Q96T59 188 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 TBCDQ9BTW9 1192 aa5.65□□□□□ -1.51
CPSF2-201ENST00000298875 USP42Q9H9J4 1324 aaKnown RBP5.65□□□□□ -1.51
CPSF2-201ENST00000298875 FBXO21O94952 628 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 STAG3L1P0CL83 205 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 UMPSP11172 480 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 H2AFXP16104 143 aaPredicted RBP5.64□□□□□ -1.51
CPSF2-201ENST00000298875 MGAT1P26572 445 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 SCNN1BP51168 640 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 ANTXR2P58335 489 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 RBBP4Q09028 425 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 TOMM20Q15388 145 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 TCEAL5Q5H9L2 206 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 TXNDC11Q6PKC3 985 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 TFAP2DQ7Z6R9 452 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 SNX32Q86XE0 403 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 COLGALT1Q8NBJ5 622 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 TMEM138Q9NPI0 162 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 FAM25EA8MYX2 175 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 BTN3A1O00481 513 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 CD3EAPO15446 510 aaKnown RBP5.64□□□□□ -1.51
CPSF2-201ENST00000298875 PRG2P13727 222 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 IFNGR2P38484 337 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 SPIRE1Q08AE8 756 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 NR1D2Q14995 579 aa5.64□□□□□ -1.51
CPSF2-201ENST00000298875 RFX4Q33E94 735 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms