RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 SPANXN3Q5MJ09 141 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 PTRHD1Q6GMV3 140 aaKnown RBP11.81□□□□□ -0.52
TGFA-201ENST00000295400 NEPROQ6NW34 567 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 AMIGO2Q86SJ2 522 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 NAT8LQ8N9F0 302 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 FAM156AQ8NDB6 213 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 NRBF2Q96F24 287 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 SPATA17Q96L03 361 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 TMEM79Q9BSE2 394 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 GPR63Q9BZJ6 419 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 ABHD16BQ9H3Z7 469 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 NSMCE4AQ9NXX6 385 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 MFHAS1Q9Y4C4 1052 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 PPME1Q9Y570 386 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 NWD2Q9ULI1 1742 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 MSI1O43347 362 aaKnown RBP11.81□□□□□ -0.52
TGFA-201ENST00000295400 USP2O75604 605 aaPredicted RBP11.81□□□□□ -0.52
TGFA-201ENST00000295400 PGK1P00558 417 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 CCDC166P0CW27 439 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 TPBGLP0DKB5 382 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 MATKP42679 507 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 BRCC3P46736 316 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 CPT1AP50416 773 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 RPL14P50914 215 aaKnown RBP11.81□□□□□ -0.52
TGFA-201ENST00000295400 ZNF460Q14592 562 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 CCDC153Q494R4 210 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 SETD3Q86TU7 594 aaPredicted RBP11.81□□□□□ -0.52
TGFA-201ENST00000295400 KLHL5Q96PQ7 755 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 KATNAL1Q9BW62 490 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 WDR41Q9HAD4 459 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 CNTNAP1P78357 1384 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 MYO1GB0I1T2 1018 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 ZBTB24O43167 697 aaPredicted RBP11.81□□□□□ -0.52
TGFA-201ENST00000295400 ME2P23368 584 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 MBTD1Q05BQ5 628 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 SIX1Q15475 284 aaPredicted RBP11.81□□□□□ -0.52
TGFA-201ENST00000295400 NPAS2Q99743 824 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 UBE2OQ9C0C9 1292 aaKnown RBP11.81□□□□□ -0.52
TGFA-201ENST00000295400 MID1IP1Q9NPA3 183 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 SMPD4Q9NXE4 827 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 PCDHGC3Q9UN70 934 aa11.81□□□□□ -0.52
TGFA-201ENST00000295400 CAPN8A6NHC0 703 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 AP3B1O00203 1094 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 CBX4O00257 560 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 INPP4BO15327 924 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 STX7O15400 261 aaKnown RBP11.8□□□□□ -0.52
TGFA-201ENST00000295400 MAP4P27816 1152 aaKnown RBP11.8□□□□□ -0.52
TGFA-201ENST00000295400 PGGT1BP53609 377 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 DDX39BQ13838 428 aaKnown RBP11.8□□□□□ -0.52
TGFA-201ENST00000295400 ZDHHC17Q8IUH5 632 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.8□□□□□ -0.52
TGFA-201ENST00000295400 OR52K2Q8NGK3 314 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 EXOC2Q96KP1 924 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 SDCBP2Q9H190 292 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 SNX5Q9Y5X3 404 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 SMIM28A0A1B0GU29 152 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 SMIM10L2AP0DMW4 78 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 SMIM10L2BP0DMW5 78 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 LHX1P48742 406 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 CCNHP51946 323 aaPredicted RBP11.8□□□□□ -0.52
TGFA-201ENST00000295400 NFYCQ13952 458 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 TMEM63BQ5T3F8 832 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 GRAMD4Q6IC98 578 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 GPC2Q8N158 579 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 WDR60Q8WVS4 1066 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 SEC14L1Q92503 715 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 SNX19Q92543 992 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 MOCOSQ96EN8 888 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 MPP4Q96JB8 637 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 MRASO14807 208 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 GUCA1CO95843 209 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 ZNF398Q8TD17 642 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 EPB41L4BQ9H329 900 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 RUBCNLQ9H714 662 aa11.8□□□□□ -0.52
TGFA-201ENST00000295400 IQCA1LA6NCM1 817 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 F8W8V4 182 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 TK2O00142 265 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 TBX10O75333 385 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 MT-CYBP00156 380 aaPredicted RBP11.79□□□□□ -0.52
TGFA-201ENST00000295400 SERPINA6P08185 405 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 C9orf57Q5W0N0 161 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 RNF168Q8IYW5 571 aaPredicted RBP11.79□□□□□ -0.52
TGFA-201ENST00000295400 TBL1YQ9BQ87 522 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 TINF2Q9BSI4 451 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 C17orf80Q9BSJ5 609 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 RGS18Q9NS28 235 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 ITM2AO43736 263 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 FBXO21O94952 628 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 MPOP05164 745 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 CCNB1P14635 433 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 MRPS5P82675 430 aaKnown RBP11.79□□□□□ -0.52
TGFA-201ENST00000295400 PFKFB4Q16877 469 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 SOWAHAQ2M3V2 549 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 SLC39A12Q504Y0 691 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 TBCELQ5QJ74 424 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 MRNIPQ6NTE8 343 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 TTC30AQ86WT1 665 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 DCAKDQ8WVC6 231 aa11.79□□□□□ -0.52
TGFA-201ENST00000295400 PRR11Q96HE9 360 aaPredicted RBP11.79□□□□□ -0.52
TGFA-201ENST00000295400 ZNF333Q96JL9 665 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms