RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PEX5P50542 639 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 PRKAA2P54646 552 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 MAD2L1Q13257 205 aaPredicted RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 FAM46CQ5VWP2 391 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 MFSD14AQ96MC6 490 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 ARL15Q9NXU5 204 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 PCDHA2Q9Y5H9 948 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CNTNAP1P78357 1384 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 PPP1R11O60927 126 aaPredicted RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 SERPINE1P05121 402 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 ALDH6A1Q02252 535 aaKnown RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CYLC2Q14093 348 aaPredicted RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 AGKQ53H12 422 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 PCID2Q5JVF3 399 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 C16orf87Q6PH81 154 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 FAM120BQ96EK7 910 aaKnown RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 VPS50Q96JG6 964 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 NRDE2Q9H7Z3 1164 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CATSPERZQ9NTU4 200 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 RIPK2O43353 540 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 PSMB4P28070 264 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 HSPA14Q0VDF9 509 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 KCNMA1Q12791 1236 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 IL17AQ16552 155 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 MARK2Q7KZI7 788 aaKnown RBP18.84■□□□□ 0.61
PCDH1-201ENST00000287008 MILR1Q7Z6M3 343 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 ANKRD7Q92527 254 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 CDHR5Q9HBB8 845 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 SERPINB10P48595 397 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 FMO1Q01740 532 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 PPIGQ13427 754 aaKnown RBP eCLIP18.84■□□□□ 0.61
PCDH1-201ENST00000287008 PWP1Q13610 501 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 DDX20Q9UHI6 824 aaKnown RBP18.84■□□□□ 0.61
PCDH1-201ENST00000287008 ADAM28Q9UKQ2 775 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 RAB23Q9ULC3 237 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 DGKAP23743 735 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 ICAM3P32942 547 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 TMED1Q13445 227 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 NAB1Q13506 487 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 AP1ARQ63HQ0 302 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 LRP10Q7Z4F1 713 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 REPS1Q96D71 796 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 FUT8Q9BYC5 575 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 ETNK2Q9NVF9 386 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 MARSP56192 900 aaKnown RBP18.84■□□□□ 0.61
PCDH1-201ENST00000287008 PPP1R26Q5T8A7 1209 aaPredicted RBP18.84■□□□□ 0.61
PCDH1-201ENST00000287008 HLA-DQA1Q5Y7H0 255 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 SH3BP5LQ7L8J4 393 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 ZNF670Q9BS34 389 aa18.84■□□□□ 0.61
PCDH1-201ENST00000287008 SAE1Q9UBE0 346 aaPredicted RBP18.84■□□□□ 0.61
PCDH1-201ENST00000287008 TRDMT1O14717 391 aaKnown RBP18.83■□□□□ 0.61
PCDH1-201ENST00000287008 CYP1A2P05177 515 aa18.83■□□□□ 0.61
PCDH1-201ENST00000287008 BRMS1LQ5PSV4 323 aa18.83■□□□□ 0.61
PCDH1-201ENST00000287008 FAM126AQ9BYI3 521 aaPredicted RBP18.83■□□□□ 0.61
PCDH1-201ENST00000287008 MID1IP1Q9NPA3 183 aa18.83■□□□□ 0.61
PCDH1-201ENST00000287008 TCF7L2Q9NQB0 619 aa18.83■□□□□ 0.61
PCDH1-201ENST00000287008 EVA1BQ9NVM1 165 aa18.83■□□□□ 0.61
PCDH1-201ENST00000287008 RPS6KB2Q9UBS0 482 aa18.83■□□□□ 0.61
PCDH1-201ENST00000287008 A0A088AWK7 358 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 IMPDH2P12268 514 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 ZNF10P21506 573 aaPredicted RBP18.83■□□□□ 0.6
PCDH1-201ENST00000287008 PSMA3P25788 255 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 RRM2P31350 389 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 BNC2Q6ZN30 1099 aaPredicted RBP18.83■□□□□ 0.6
PCDH1-201ENST00000287008 C11orf74Q86VG3 221 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 CAVIN3Q969G5 261 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 GOLGA2P5Q9HBQ8 144 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 OPTCQ9UBM4 332 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 ROBO3Q96MS0 1386 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 NFKBIEO00221 500 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 TARSP26639 723 aaKnown RBP18.83■□□□□ 0.6
PCDH1-201ENST00000287008 GPR1P46091 355 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 FOXR2Q6PJQ5 311 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 CENPLQ8N0S6 344 aaPredicted RBP18.83■□□□□ 0.6
PCDH1-201ENST00000287008 ATAD1Q8NBU5 361 aa18.83■□□□□ 0.6
PCDH1-201ENST00000287008 SMG7Q92540 1137 aaKnown RBP18.83■□□□□ 0.6
PCDH1-201ENST00000287008 MED1Q15648 1581 aaPredicted RBP18.83■□□□□ 0.6
PCDH1-201ENST00000287008 MOXD2PA6NHM9 499 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 AP5Z1O43299 807 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 NFKB1P19838 968 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 PFKPQ01813 784 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 RUNX1T1Q06455 604 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 MMRN1Q13201 1228 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 ARSHQ5FYA8 562 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 OR52K1Q8NGK4 314 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 NIFKQ9BYG3 293 aaKnown RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 BRD9Q9H8M2 597 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 KRCC1Q9NPI7 259 aaPredicted RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 A0A0G2JLL6 359 aaPredicted RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 CYP7B1O75881 506 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 GNRH1P01148 92 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 HTR1BP28222 390 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 ACSM2AQ08AH3 577 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 ACSM2BQ68CK6 577 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 PRRT2Q7Z6L0 340 aaPredicted RBP18.82■□□□□ 0.6
PCDH1-201ENST00000287008 GPSM1Q86YR5 675 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 MIER2Q8N344 545 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 AASDHPPTQ9NRN7 309 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 NINJ2Q9NZG7 142 aa18.82■□□□□ 0.6
PCDH1-201ENST00000287008 RICTORQ6R327 1708 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms