RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 HALP42357 657 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 STT3AP46977 705 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RBP5P82980 135 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 POU5F1BQ06416 359 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 WASHC5Q12768 1159 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TRNP1Q6NT89 227 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 Q6ZNX1 250 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CCDC80Q76M96 950 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PATL1Q86TB9 770 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RSPH3Q86UC2 560 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 LRRN4Q8WUT4 740 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DDX56Q9NY93 547 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PACSIN3Q9UKS6 424 aa16.32■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CASQ2O14958 399 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ITM2AO43736 263 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MAP3K6O95382 1288 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TSHRP16473 764 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 HADHQ16836 314 aaKnown RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KCTD21Q4G0X4 260 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 OGFRL1Q5TC84 451 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ZNF410Q86VK4 478 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 IFNLR1Q8IU57 520 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NIPA2Q8N8Q9 360 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ACTRT2Q8TDY3 377 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ZNF778Q96MU6 729 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MTG1Q9BT17 334 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GCOM2Q9BZD3 368 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 COL1A2P08123 1366 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DENRO43583 198 aaKnown RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SIN3BO75182 1162 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SERPINB7O75635 380 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 HMGCRP04035 888 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 BPGMP07738 259 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 P4HA1P13674 534 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DARSP14868 501 aaKnown RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CDH2P19022 906 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 THPOP40225 353 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PSMD7P51665 324 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PPP1R26Q5T8A7 1209 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NPNTQ6UXI9 565 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RFX6Q8HWS3 928 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NDUFAF2Q8N183 169 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PPP1R14CQ8TAE6 165 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PEBP4Q96S96 227 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GOLGA2P5Q9HBQ8 144 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 USP18Q9UMW8 372 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DNAJC16Q9Y2G8 782 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TTLL3Q9Y4R7 772 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NME7Q9Y5B8 376 aa16.31■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PEX1O43933 1283 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 C1QAP02745 245 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PDGFRBP09619 1106 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TFPTP0C1Z6 253 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 VDRP11473 427 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ATICP31939 592 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RPL26P61254 145 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CNGA3Q16281 694 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SCYL2Q6P3W7 929 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 FAM183BPQ6ZVS7 135 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 WDR75Q8IWA0 830 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SCUBE3Q8IX30 993 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DQX1Q8TE96 717 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GIPC3Q8TF64 312 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GFM2Q969S9 779 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ZFRQ96KR1 1074 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NT5C1AQ9BXI3 368 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GPATCH2LQ9NWQ4 482 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GTF2IRD1Q9UHL9 959 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 APOBEC2Q9Y235 224 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TMEM98Q9Y2Y6 226 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CDY2AQ9Y6F7 541 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 AK5Q9Y6K8 562 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CITO14578 2027 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SMIM35A0A1B0GVV1 85 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SH3PXD2BA1X283 911 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PDGFRAP16234 1089 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ITGAXP20702 1163 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MYBPC1Q00872 1141 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CDK18Q07002 472 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ZNF362Q5T0B9 420 aaPredicted RBP16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MROH9Q5TGP6 573 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PMF1Q6P1K2 205 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KBTBD6Q86V97 674 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RNF169Q8NCN4 708 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RXFP2Q8WXD0 754 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MRPS26Q9BYN8 205 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SMYD2Q9NRG4 433 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 THAP1Q9NVV9 213 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SORCS3Q9UPU3 1222 aa16.3■□□□□ 0.2
MAP1LC3B-201ENST00000268607 FKTNO75072 461 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KLHL2O95198 593 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CRTAMO95727 393 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CHRNA1P02708 482 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PFKMP08237 780 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KRT7P08729 469 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SRGAP2BP0DMP2 458 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms