RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 CYP4V2Q6ZWL3 525 aaPredicted RBP18.3■□□□□ 0.52
ITGA6-201ENST00000264107 MED15Q96RN5 788 aa18.3■□□□□ 0.52
ITGA6-201ENST00000264107 RUSC1Q9BVN2 902 aa18.3■□□□□ 0.52
ITGA6-201ENST00000264107 MID1IP1Q9NPA3 183 aa18.3■□□□□ 0.52
ITGA6-201ENST00000264107 BLOC1S4Q9NUP1 217 aa18.3■□□□□ 0.52
ITGA6-201ENST00000264107 ZSCAN5BA6NJL1 495 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 BTNL10A8MVZ5 291 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 PMPCBO75439 489 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 IL6STP40189 918 aaPredicted RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 CRKLP46109 303 aaKnown RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 POLRMTO00411 1230 aaKnown RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 STX11O75558 287 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 RECQL5O94762 991 aaPredicted RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 CRTAMO95727 393 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 SLC2A4P14672 509 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 CHI3L1P36222 383 aaPredicted RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 PHKA2P46019 1235 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 MTA1Q13330 715 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 NIF3L1Q9GZT8 377 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 MED28Q9H204 178 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 POMKQ9H5K3 350 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 CAB39LQ9H9S4 337 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 CHMP1AQ9HD42 196 aaPredicted RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 GNG2P59768 71 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 SCN1BQ07699 218 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 ILF2Q12905 390 aaKnown RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 ELMOD2Q8IZ81 293 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 MCOLN2Q8IZK6 566 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 ILVBLA1L0T0 632 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 LYPLA1O75608 230 aaPredicted RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 PGAM1P18669 254 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 MAPK12P53778 367 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 RBM20Q5T481 1227 aaKnown RBP18.29■□□□□ 0.52
ITGA6-201ENST00000264107 MFSD7Q6UXD7 560 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 CATSPER4Q7RTX7 472 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 THAP5Q7Z6K1 395 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 KRT77Q7Z794 578 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 ZNF671Q8TAW3 534 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 ZFP42Q96MM3 310 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 APOL2Q9BQE5 337 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 CDH19Q9H159 772 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 XPNPEP3Q9NQH7 507 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 KIF1BO60333 1816 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 H3BMM5 538 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 YES1P07947 543 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 CCNA1P78396 465 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 SCN4BQ8IWT1 228 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 LRRC19Q9H756 370 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 GPATCH2LQ9NWQ4 482 aa18.29■□□□□ 0.52
ITGA6-201ENST00000264107 NPHP4O75161 1426 aaPredicted RBP18.28■□□□□ 0.52
ITGA6-201ENST00000264107 CPNE3O75131 537 aaKnown RBP18.28■□□□□ 0.52
ITGA6-201ENST00000264107 CST1P01037 141 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 P2RY8Q86VZ1 359 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 ZFYVE1Q9HBF4 777 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 PORP16435 677 aaPredicted RBP18.28■□□□□ 0.52
ITGA6-201ENST00000264107 ABL2P42684 1182 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 RXRGP48443 463 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 ZNF829Q3KNS6 432 aaPredicted RBP18.28■□□□□ 0.52
ITGA6-201ENST00000264107 DNAJB14Q8TBM8 379 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 ZNF302Q9NR11 478 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 ERAP1Q9NZ08 941 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 USP18Q9UMW8 372 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 PCNAP12004 261 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 MAPKAPK2P49137 400 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 SLC1A5Q15758 541 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.28■□□□□ 0.52
ITGA6-201ENST00000264107 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.28■□□□□ 0.52
ITGA6-201ENST00000264107 INVSQ9Y283 1065 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 H0Y858 1186 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 MRNIPQ6NTE8 343 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 SH3RF1Q7Z6J0 888 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 CYP4X1Q8N118 509 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 ZNF668Q96K58 619 aaPredicted RBP18.28■□□□□ 0.52
ITGA6-201ENST00000264107 FAM167AQ96KS9 214 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 VANGL2Q9ULK5 521 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 SSR3Q9UNL2 185 aa18.28■□□□□ 0.52
ITGA6-201ENST00000264107 VPS4BO75351 444 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 PIAS1O75925 651 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 HNF4AP41235 474 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 CDC42P60953 191 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 EFR3AQ14156 821 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 COLGALT1Q8NBJ5 622 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 PNPLA8Q9NP80 782 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 EGFL7Q9UHF1 273 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 EPHA3P29320 983 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 FBXW4P57775 412 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 GMFBP60983 142 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 FOXO4P98177 505 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 GANQ9H2C0 597 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 ERGIC3Q9Y282 383 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 HDAC3O15379 428 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 DDX3YO15523 660 aaKnown RBP18.27■□□□□ 0.52
ITGA6-201ENST00000264107 AVILO75366 819 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 LIN54Q6MZP7 749 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 FAM136AQ96C01 138 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 KIF12Q96FN5 646 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 ZC3H10Q96K80 434 aaKnown RBP18.27■□□□□ 0.52
ITGA6-201ENST00000264107 NPAS2Q99743 824 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 ADPRHL2Q9NX46 363 aa18.27■□□□□ 0.52
ITGA6-201ENST00000264107 SLC37A4O43826 429 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms