RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 NAGPAQ9UK23 515 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 APOBEC2Q9Y235 224 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 HTR3EA5X5Y0 456 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 POM121BA6NF01 834 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 C3orf70A6NLC5 250 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 ACSL3O95573 720 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 CCNE2O96020 404 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 PLGP00747 810 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 APOA1P02647 267 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 RALAP11233 206 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 PPIAP62937 165 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 C19orf57Q0VDD7 668 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 STK4Q13043 487 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ZNF235Q14590 738 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ADPRMQ3LIE5 342 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 FNDC3BQ53EP0 1204 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 TMEM135Q86UB9 458 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ENDOVQ8N8Q3 282 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 SCAIQ8N9R8 606 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ARRDC4Q8NCT1 418 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 OR6P1Q8NGX9 317 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 LARP4BQ92615 738 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 TNIP3Q96KP6 325 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 IL12RB2Q99665 862 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 SAYSD1Q9NPB0 183 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 GRHL1Q9NZI5 618 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 JRKLQ9Y4A0 524 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 MFHAS1Q9Y4C4 1052 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ITPR1Q14643 2758 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 A0A0G2JLL6 359 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 TMEM191CA6NGB0 347 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 H0Y3Z8 333 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ZNF701M0R085 212 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 FXYD1O00168 92 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 VARSP26640 1264 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 CXCR5P32302 372 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 SOX11P35716 441 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 MAP3K8P41279 467 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 CPA2P48052 419 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 RAB15P59190 212 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ALDH6A1Q02252 535 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 FOXM1Q08050 763 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 PARP6Q2NL67 630 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 DOK6Q6PKX4 331 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 PADI6Q6TGC4 694 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 RAD9BQ6WBX8 426 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 SNX20Q7Z614 316 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 PRRT2Q7Z6L0 340 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 ADCK1Q86TW2 530 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 PDIK1LQ8N165 341 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 GAB3Q8WWW8 586 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 TBATAQ96M53 351 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 TSSK1BQ9BXA7 367 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ZNF275Q9NSD4 429 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 GJD2Q9UKL4 321 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ZNF318Q5VUA4 2279 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ANKRD11Q6UB99 2663 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 GOLGA8RI6L899 631 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 CYP1A2P05177 515 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ASNSP08243 561 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 CHRNA3P32297 505 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 HSD17B3P37058 310 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 CCR4P51679 360 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 IL2P60568 153 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 TXNL4AP83876 142 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 ITGB3BPQ13352 177 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 PTPRRQ15256 657 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ATP13A4Q4VNC1 1196 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ZC2HC1CQ53FD0 456 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 ZNF667Q5HYK9 610 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 LILRA6Q6PI73 481 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 SETD3Q86TU7 594 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 MICALL2Q8IY33 904 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 CACTIN-AS1Q8N1I8 211 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 SNX31Q8N9S9 440 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 TUBGCP3Q96CW5 907 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ATXN7L3BQ96GX2 97 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 MCCC1Q96RQ3 725 aaPredicted RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 LRRC3Q9BY71 257 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.69□□□□□ -1.82
RTTN-201ENST00000255674 TMEM245Q9H330 911 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 USP36Q9P275 1121 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 SHOC2Q9UQ13 582 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 AURKCQ9UQB9 309 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 CHD5Q8TDI0 1954 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 PGRMC1O00264 195 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 ALOX15BO15296 676 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 ICMTO60725 284 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 SUPT3HO75486 399 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 DGAT1O75907 488 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 LRATO95237 230 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 GHRP10912 638 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 TARSP26639 723 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 STXBP1P61764 594 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 SURF1Q15526 300 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 FASTKD1Q53R41 847 aaKnown RBP3.69□□□□□ -1.82
RTTN-201ENST00000255674 PHF19Q5T6S3 580 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 C1orf146Q5VVC0 180 aa3.69□□□□□ -1.82
RTTN-201ENST00000255674 NUP93Q8N1F7 819 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms