RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TEKT5Q96M29 485 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 TMEM209Q96SK2 561 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 LBHD1Q9BQE6 289 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 PNPOQ9NVS9 261 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 LRRC42Q9Y546 428 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 PTPRDP23468 1912 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 BPTFQ12830 3046 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 MGEA5O60502 916 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 KRT36O76013 467 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 B3GAT3O94766 335 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 LMNAP02545 664 aaKnown RBP19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 CTGFP29279 349 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 SERPINB6P35237 376 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 SPRP35270 261 aaPredicted RBP19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 MGAT3Q09327 533 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 TAF11Q15544 211 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 DLG2Q15700 870 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ITPRIPL1Q6GPH6 555 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 CD300LGQ6UXG3 332 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 RSPH3Q86UC2 560 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 TNS4Q8IZW8 715 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 CNTD1Q8N815 330 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ACVR1CQ8NER5 493 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 DQX1Q8TE96 717 aaKnown RBP19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 SIKE1Q9BRV8 207 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ADAM28Q9UKQ2 775 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 PLA2G4CQ9UP65 541 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 NEU3Q9UQ49 428 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 NLRC5Q86WI3 1866 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ATP5BP06576 529 aaKnown RBP19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ODC1P11926 461 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 SERPINB8P50452 374 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 IRF9Q00978 393 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ITGA9Q13797 1035 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 FRG1Q14331 258 aaKnown RBP19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 RABGAP1LQ5R372 815 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 DCLRE1AQ6PJP8 1040 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ARHGAP36Q6ZRI8 547 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 OTOP3Q7RTS5 596 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 MRPL10Q7Z7H8 261 aaKnown RBP19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 SERINC5Q86VE9 423 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 LRRTM3Q86VH5 581 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 RASAL3Q86YV0 1011 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 PLCD3Q8N3E9 789 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 SCAMP5Q8TAC9 235 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 IRGQQ8WZA9 623 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 ACBD6Q9BR61 282 aa19.94■□□□□ 0.78
CDC42EP1-201ENST00000249014 GOLGA8TH3BQL2 631 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 TNPO2O14787 897 aaKnown RBP19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 SRGAP2BP0DMP2 458 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 RALBP11234 206 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 GRK2P25098 689 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 NMBRP28336 390 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 CDC25CP30307 473 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 RCN1Q15293 331 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 KCNMB4Q86W47 210 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 OR10T2Q8NGX3 314 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 OR6Y1Q8NGX8 325 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 SOCS4Q8WXH5 440 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 RNF34Q969K3 372 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 NAF1Q96HR8 494 aaKnown RBP19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 VAT1Q99536 393 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 PKMYT1Q99640 499 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 MCMBPQ9BTE3 642 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 MAGEC1O60732 1142 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 CPA3P15088 417 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 CD52P31358 61 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 NPY2RP49146 381 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 RAP1GDS1P52306 607 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 CCDC153Q494R4 210 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 USP33Q8TEY7 942 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 ZNF419Q96HQ0 510 aaPredicted RBP19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 C20orf96Q9NUD7 363 aaPredicted RBP19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 SOX13Q9UN79 622 aa19.93■□□□□ 0.78
CDC42EP1-201ENST00000249014 PATJQ8NI35 1801 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 A0A096LPK6 155 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 CCDC78A2IDD5 438 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 SPECC1L-ADORA2AF8WAN1 911 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 ZNF195O14628 629 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 GPR182O15218 404 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 AOC1P19801 751 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 ZNF135P52742 658 aaPredicted RBP19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 SESN3P58005 492 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 ABCE1P61221 599 aaKnown RBP19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 EIF4EBP2Q13542 120 aaPredicted RBP19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 TBCCQ15814 346 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 RWDD4Q6NW29 188 aaKnown RBP19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 CLEC14AQ86T13 490 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 CLPTM1LQ96KA5 538 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 FAM161BQ96MY7 647 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 ANKRD27Q96NW4 1050 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 OXCT2Q9BYC2 517 aaPredicted RBP19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 IL22Q9GZX6 179 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 SIK2Q9H0K1 926 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 RRAGCQ9HB90 399 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 DMAP1Q9NPF5 467 aaPredicted RBP19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 IARS2Q9NSE4 1012 aaKnown RBP19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 PADI3Q9ULW8 664 aa19.92■□□□□ 0.78
CDC42EP1-201ENST00000249014 KPNA6O60684 536 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms