RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 C9orf16Q9BUW7 83 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 POPDC2Q9HBU9 364 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 OPTCQ9UBM4 332 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 INVSQ9Y283 1065 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 TRDMT1O14717 391 aaKnown RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 CALCAP01258 141 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ALADP13716 330 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 MIPP30301 263 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 RPA3P35244 121 aaPredicted RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 GNA13Q14344 377 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ARMC12Q5T9G4 340 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 RNF148Q8N7C7 305 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 SEMA6AQ9H2E6 1030 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ZMYND8Q9ULU4 1186 aaPredicted RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 CRYL1Q9Y2S2 319 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 TSPAN19P0C672 248 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 S100A3P33764 101 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 PIK3CGP48736 1102 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 NEK3P51956 506 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 CDK16Q00536 496 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ACAP1Q15027 740 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 SETMARQ53H47 684 aaPredicted RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 NIPA1Q7RTP0 329 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 TRAPPC12Q8WVT3 735 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 DPF3Q92784 378 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 AHCYL2Q96HN2 611 aaKnown RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 FANCEQ9HB96 536 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 MYRFQ9Y2G1 1151 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 PCDHGA4Q9Y5G9 962 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 SERPINH1P50454 418 aaKnown RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 PLK1P53350 603 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 DPYSL3Q14195 570 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 CDC73Q6P1J9 531 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 LRRC74BQ6ZQY2 392 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 TLK2Q86UE8 772 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 CDRT15Q96T59 188 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 XPNPEP3Q9NQH7 507 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 NCKAP1Q9Y2A7 1128 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 SMIM22K7EJ46 135 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 CD3EAPO15446 510 aaKnown RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 TBC1D12O60347 775 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 EPN2O95208 641 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 IL1R1P14778 569 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 SHMT1P34896 483 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 CBWD6Q4V339 395 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ZPBP2Q6X784 338 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 BRSK2Q8IWQ3 736 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 TSEN2Q8NCE0 465 aaKnown RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 SPATA20Q8TB22 786 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 CERKQ8TCT0 537 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 KIAA1683Q9H0B3 1180 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 MMADHCQ9H3L0 296 aaPredicted RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 A0A0U1RQJ8 604 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 H3BMM5 538 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 DDX3XO00571 662 aaKnown RBP eCLIP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ACKR2O00590 384 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 TPP1O14773 563 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 DCXO43602 365 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 KCNH1O95259 989 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ANXA6P08133 673 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 LBPP18428 481 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 BDNFP23560 247 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 BTG3Q14201 252 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 FRG1Q14331 258 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 IRAK1BP1Q5VVH5 260 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 KYAT3Q6YP21 454 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 CLYBLQ8N0X4 340 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ZCCHC9Q8N567 271 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 FHDC1Q9C0D6 1143 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 SENP6Q9GZR1 1112 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ENTPD4Q9Y227 616 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 E5RJQ4 531 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 SH3BGRLO75368 114 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 CBX6O95503 412 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 AMHP03971 560 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 COX7A2P14406 83 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 RBL1P28749 1068 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 RRP1BQ14684 758 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 CRY1Q16526 586 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 CYP2A13Q16696 494 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 TTMPQ5BVD1 217 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 SAMD4BQ5PRF9 694 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 PPM1LQ5SGD2 360 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ZCCHC7Q8N3Z6 543 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 LRRC39Q96DD0 335 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 EFCAB10A6NFE3 127 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ASNA1O43681 348 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 TRAF3Q13114 568 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 DGUOKQ16854 277 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 KLHL17Q6TDP4 642 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 TMC5Q6UXY8 1006 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 USP45Q70EL2 814 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 VAT1Q99536 393 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 MRPL9Q9BYD2 267 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms