RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CAVIN3Q969G5 261 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 NXPE3Q969Y0 559 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 OSBPL9Q96SU4 736 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 BBS2Q9BXC9 721 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 CATSPERBQ9H7T0 1116 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 ARHGEF4Q9NR80 690 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 PPARGC1AQ9UBK2 798 aaKnown RBP14.86□□□□□ -0.03
LINC00339-208ENST00000634934 MUTYHQ9UIF7 546 aa14.86□□□□□ -0.03
LINC00339-208ENST00000634934 GFRA2O00451 464 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 FGF10O15520 208 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-208ENST00000634934 SHOX2O60902 331 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-208ENST00000634934 ADH1CP00326 375 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 CYP17A1P05093 508 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 RHOQP17081 205 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 ERCC2P18074 760 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 HOXC13P31276 330 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 DYNLT1P63172 113 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 DPYSQ14117 519 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 ARTNQ5T4W7 220 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 TTC39BQ5VTQ0 682 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-208ENST00000634934 LEKR1Q6ZMV7 388 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 CARNMT1Q8N4J0 409 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 SLC44A3Q8N4M1 653 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 GOLGA6L1Q8N7Z2 621 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 PCDH19Q8TAB3 1148 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 PBKQ96KB5 322 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 RNF157Q96PX1 679 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 OSBPL8Q9BZF1 889 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 HPS4Q9NQG7 708 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 NEU3Q9UQ49 428 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 MYO10Q9HD67 2058 aa14.85□□□□□ -0.03
LINC00339-208ENST00000634934 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 PDE2AO00408 941 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-208ENST00000634934 SYF2O95926 243 aaKnown RBP14.84□□□□□ -0.03
LINC00339-208ENST00000634934 ADH5P11766 374 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 CDH4P55283 916 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 NR1H3Q13133 447 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 RUNX3Q13761 415 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 PPP2R5EQ16537 467 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 TAZQ16635 292 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 C5orf22Q49AR2 442 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 FYB2Q5VWT5 728 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 ALS2CLQ60I27 953 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 VSIG1Q86XK7 387 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 CCDC117Q8IWD4 279 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-208ENST00000634934 CPA6Q8N4T0 437 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 PQLC3Q8N755 202 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 SPATA4Q8NEY3 305 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 FAF2Q96CS3 445 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 P2RY11Q96G91 374 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 SH3GL2Q99962 352 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 ECT2Q9H8V3 914 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 ETNK2Q9NVF9 386 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 GTSE1Q9NYZ3 720 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 VPS18Q9P253 973 aa14.84□□□□□ -0.03
LINC00339-208ENST00000634934 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-208ENST00000634934 A0A1B0GVM2 712 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 TCAF2A6NFQ2 919 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 ZNF487B1APH4 448 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 H0Y626 953 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 TNFRSF10AO00220 468 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 DLL1O00548 723 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 APOL1O14791 398 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 ZNF185O15231 689 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 CST8O60676 142 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 CLDN11O75508 207 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 PENKP01210 267 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-208ENST00000634934 TYRP14679 529 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 HOXD9P28356 352 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-208ENST00000634934 OR1E1P30953 314 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 PAFAH1B1P43034 410 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 GAD2Q05329 585 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 ZNF177Q13360 481 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-208ENST00000634934 CDH18Q13634 790 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 TFDP2Q14188 446 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 MPP7Q5T2T1 576 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 CCDC181Q5TID7 509 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 EMC10Q5UCC4 262 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 CHST9Q7L1S5 443 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 NLRP14Q86W24 1093 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 MREGQ8N565 214 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 NAT16Q8N8M0 369 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 RTL3Q8N8U3 475 aaKnown RBP14.83□□□□□ -0.04
LINC00339-208ENST00000634934 CSGALNACT1Q8TDX6 532 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 MS4A14Q96JA4 679 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 HERPUD2Q9BSE4 406 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 MARK1Q9P0L2 795 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 MFHAS1Q9Y4C4 1052 aa14.83□□□□□ -0.04
LINC00339-208ENST00000634934 OTOL1A6NHN0 477 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-208ENST00000634934 DCLK1O15075 740 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 TJP3O95049 919 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 LUC7L3O95232 432 aaKnown RBP14.82□□□□□ -0.04
LINC00339-208ENST00000634934 PTPN7P35236 360 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 ADCY2Q08462 1091 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 ITPRIPL2Q3MIP1 535 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 C1orf228Q6PIY5 440 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 ADAT2Q7Z6V5 191 aaKnown RBP14.82□□□□□ -0.04
LINC00339-208ENST00000634934 MFN1Q8IWA4 741 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 CAPZA3Q96KX2 299 aa14.82□□□□□ -0.04
LINC00339-208ENST00000634934 NDFIP2Q9NV92 336 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms