RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 QPCTQ16769 361 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 TMEM240Q5SV17 173 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 AFMIDQ63HM1 303 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 NADSYN1Q6IA69 706 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 C3orf62Q6ZUJ4 267 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PID1Q7Z2X4 250 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CPLX4Q7Z7G2 160 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 RTL3Q8N8U3 475 aaKnown RBP21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CHMP6Q96FZ7 201 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CEP295NLQ96MC4 621 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 XPO6Q96QU8 1125 aaKnown RBP21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PRMT1Q99873 361 aaKnown RBP21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MCOLN1Q9GZU1 580 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 HSFX1Q9UBD0 423 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 TBK1Q9UHD2 729 aa21.13■□□□□ 0.97
CNTNAP3B-212ENST00000617422 LCHNA4D1U4 455 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 RASSF9O75901 435 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 APOEP02649 317 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MX2P20592 715 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 HTR7P34969 479 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 LACTB2Q53H82 288 aaPredicted RBP21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 SNX30Q5VWJ9 437 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 RAP1GAP2Q684P5 730 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 FBXL22Q6P050 247 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 ATP11CQ8NB49 1132 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 BTN2A3PQ96KV6 586 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MYRFLQ96LU7 910 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 AGAP3Q96P47 875 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 ZBP1Q9H171 429 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CATSPERBQ9H7T0 1116 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MRPL17Q9NRX2 175 aaKnown RBP21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PIH1D1Q9NWS0 290 aaKnown RBP21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 EXOC1LA0A1B0GW35 172 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 STK10O94804 968 aaKnown RBP21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 AGTP01019 485 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 DRD4P21917 467 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 FDFT1P37268 417 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 FPGSQ05932 587 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 TWF1Q12792 350 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PLD1Q13393 1074 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PPP1R21Q6ZMI0 780 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 TFAP2DQ7Z6R9 452 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 EXOC3L1Q86VI1 746 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CNTD1Q8N815 330 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 SIGLEC10Q96LC7 697 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 KLC4Q9NSK0 619 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 KLHL8Q9P2G9 620 aaPredicted RBP21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 IGSF9Q9P2J2 1179 aa21.12■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CDH23Q9H251 3354 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 IGLV3-10A0A075B6K4 115 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 COCHO43405 550 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MAFKO60675 156 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 SPARCL1Q14515 664 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PARP6Q2NL67 630 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 TMEM150AQ86TG1 271 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CIR1Q86X95 450 aaPredicted RBP21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 FIBCD1Q8N539 461 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 KLHL23Q8NBE8 558 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 FBF1Q8TES7 1133 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 BRD8Q9H0E9 1235 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 RNF38Q9H0F5 515 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 STMN4Q9H169 189 aaPredicted RBP21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 ZNF212Q9UDV6 495 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 LGALS13Q9UHV8 139 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PCDHB12Q9Y5F1 795 aa21.11■□□□□ 0.97
CNTNAP3B-212ENST00000617422 POC1B-GALNT4F8VUJ3 575 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PRRG1O14668 218 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 JCHAINP01591 159 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CNPP09543 421 aaKnown RBP21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CSH1P0DML2 217 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CSH2P0DML3 217 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PPM1AP35813 382 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 ALDH1A3P47895 512 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 RING1Q06587 406 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PPIGQ13427 754 aaKnown RBP eCLIP21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 PALM2Q8IXS6 379 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 ATP6V0D2Q8N8Y2 350 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MDM1Q8TC05 714 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CLP1Q92989 425 aaKnown RBP21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MRRFQ96E11 262 aaKnown RBP21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 KDM4CQ9H3R0 1056 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 C2orf78A6NCI8 922 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 WASH4PA8MWX3 477 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 SYN1P17600 705 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 TEX44Q53QW1 395 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 TCEAL8Q8IYN2 117 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 ZNF276Q8N554 614 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 USP33Q8TEY7 942 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MAML1Q92585 1016 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 SLC40A1Q9NP59 571 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 DNMT3LQ9UJW3 386 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 INSL5Q9Y5Q6 135 aa21.1■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CHUKO15111 745 aa21.09■□□□□ 0.97
CNTNAP3B-212ENST00000617422 CDH16O75309 829 aa21.09■□□□□ 0.97
CNTNAP3B-212ENST00000617422 C1QAP02745 245 aa21.09■□□□□ 0.97
CNTNAP3B-212ENST00000617422 ATP5C1P36542 298 aaKnown RBP21.09■□□□□ 0.97
CNTNAP3B-212ENST00000617422 MMP13P45452 471 aa21.09■□□□□ 0.97
CNTNAP3B-212ENST00000617422 SPRED2Q7Z698 418 aa21.09■□□□□ 0.97
CNTNAP3B-212ENST00000617422 DNAJB7Q7Z6W7 309 aaPredicted RBP21.09■□□□□ 0.97
CNTNAP3B-212ENST00000617422 OVCA2Q8WZ82 227 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms