RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 GOT1P17174 413 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 HTR7P34969 479 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 GET4Q7L5D6 327 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 OTOAQ7RTW8 1153 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 TRMT11Q7Z4G4 463 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 EPS8L3Q8TE67 593 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 ARNTL2Q8WYA1 636 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 CPXM1Q96SM3 734 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 IL22Q9GZX6 179 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 EPN3Q9H201 632 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 H3BMM5 538 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PAGE1O75459 146 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 MTA2O94776 668 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 TPBGLP0DKB5 382 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 MAP3K10Q02779 954 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 RAB30Q15771 203 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 TPGS2Q68CL5 300 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 FAM43BQ6ZT52 329 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 SLC26A9Q7LBE3 791 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 XYLT1Q86Y38 959 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 SLC4A11Q8NBS3 891 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 MRPL1Q9BYD6 325 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 PRDM12Q9H4Q4 367 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 RGS18Q9NS28 235 aa9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 RCOR3Q9P2K3 495 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 USP15Q9Y4E8 981 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 MRPL42Q9Y6G3 142 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-208ENST00000615606 VAPBO95292 243 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 FAM163BP0C2L3 166 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CRABP2P29373 138 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 TKTP29401 623 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 ADRA1BP35368 520 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 PBX1P40424 430 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 RPL21P46778 160 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 VEGFBP49765 207 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 THOP1P52888 689 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 PCID2Q5JVF3 399 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 ZNF470Q6ECI4 717 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 PLEKHA7Q6IQ23 1121 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 KIAA1324Q6UXG2 1013 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CACUL1Q86Y37 369 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 SLC22A9Q8IVM8 553 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 FAM9CQ8IZT9 166 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 GRIN3AQ8TCU5 1115 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 FNIP1Q8TF40 1166 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 TRIB2Q92519 343 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 OTUB1Q96FW1 271 aaPredicted RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 PCED1BQ96HM7 432 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CPNE1Q99829 537 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 MYH2Q9UKX2 1941 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 ADAMTS3O15072 1205 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 NDUFS2O75306 463 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 MAPK1P28482 360 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 ADSSP30520 456 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CD86P42081 329 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 IRF5Q13568 498 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CSHL1Q14406 222 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CDCA2Q69YH5 1023 aaPredicted RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 JOSD2Q8TAC2 188 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 SPATA17Q96L03 361 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 YY1AP1Q9H869 796 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 COPS7BQ9H9Q2 264 aaPredicted RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 FBXO10Q9UK96 956 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 EIF3LQ9Y262 564 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 UBR2Q8IWV8 1755 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 hCG_1818297A0A087WSY0 165 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 TRDMT1O14717 391 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 PMM2O15305 246 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 LIASO43766 372 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 PSMB4P28070 264 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 HALP42357 657 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 XRCC4Q13426 336 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 TRIM60Q495X7 471 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 HSP90AA5PQ58FG0 334 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 ARHGAP17Q68EM7 881 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 LRRC8EQ6NSJ5 796 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 NPNTQ6UXI9 565 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 KREMEN2Q8NCW0 462 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CAVIN3Q969G5 261 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 PCDHB18PQ96TA0 734 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 B3GNT5Q9BYG0 378 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 ETNK1Q9HBU6 452 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 HBS1LQ9Y450 684 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 ASB3Q9Y575 518 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 GRM6O15303 877 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 FBXW4P57775 412 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 KCNK10P57789 538 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 TGM3Q08188 693 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 GRM3Q14832 879 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 GRAMD1BQ3KR37 738 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CACHD1Q5VU97 1274 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 AP1ARQ63HQ0 302 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 KRT80Q6KB66 452 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 TAPT1Q6NXT6 567 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 RRM2BQ7LG56 351 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 RD3Q7Z3Z2 195 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 RPAINQ86UA6 219 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 ZCCHC9Q8N567 271 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms