RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SPEM2Q0P670 501 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 ALFQ53S48 1182 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 TTC39BQ5VTQ0 682 aaPredicted RBP19.41■□□□□ 0.7
CCDC9-205ENST00000600117 LAIR1Q6GTX8 287 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 LRRC31Q6UY01 552 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 ZNF852Q6ZMS4 543 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 RALGPS2Q86X27 583 aaPredicted RBP19.41■□□□□ 0.7
CCDC9-205ENST00000600117 FAM71BQ8TC56 605 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 KIAA1524Q8TCG1 905 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 WFDC5Q8TCV5 224 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 HSPH1Q92598 858 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 PCDH18Q9HCL0 1135 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.41■□□□□ 0.7
CCDC9-205ENST00000600117 STIM2Q9P246 746 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 PPARGC1AQ9UBK2 798 aaKnown RBP19.41■□□□□ 0.7
CCDC9-205ENST00000600117 ZNF212Q9UDV6 495 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 ASPMQ8IZT6 3477 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 A0A1B0GVM2 712 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 TCAF2A6NFQ2 919 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 SRGAP2O75044 1071 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 CNTN5O94779 1100 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 CISD3P0C7P0 127 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 EIF2DP41214 584 aaKnown RBP19.4■□□□□ 0.7
CCDC9-205ENST00000600117 SLC6A11P48066 632 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 MESP2Q0VG99 397 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 MTAPQ13126 283 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 FZD5Q13467 585 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 NT5DC3Q86UY8 548 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 RHOT1Q8IXI2 618 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 PHTF2Q8N3S3 785 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 NAT16Q8N8M0 369 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 TBC1D31Q96DN5 1066 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 MSANTD3Q96H12 275 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 EPAS1Q99814 870 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 TRMT1Q9NXH9 659 aaKnown RBP19.4■□□□□ 0.7
CCDC9-205ENST00000600117 MPP6Q9NZW5 540 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.4■□□□□ 0.7
CCDC9-205ENST00000600117 LAMA1P25391 3075 aa19.4■□□□□ 0.7
CCDC9-205ENST00000600117 TYW5A2RUC4 315 aaKnown RBP19.39■□□□□ 0.69
CCDC9-205ENST00000600117 USP27XA6NNY8 438 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 PSTPIP1O43586 416 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 CREB3O43889 395 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 TULP3O75386 442 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 TDGF1P13385 188 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 MARCKSL1P49006 195 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 CHST9Q7L1S5 443 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 SYCE1Q8N0S2 351 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 CCAR2Q8N163 923 aaKnown RBP19.39■□□□□ 0.69
CCDC9-205ENST00000600117 TSC1Q92574 1164 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 LMLNQ96KR4 655 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 XPO6Q96QU8 1125 aaKnown RBP19.39■□□□□ 0.69
CCDC9-205ENST00000600117 SLC2A11Q9BYW1 496 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 ZYG11BQ9C0D3 744 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 FBRSL1Q9HCM7 1045 aaKnown RBP19.39■□□□□ 0.69
CCDC9-205ENST00000600117 DNAJC17Q9NVM6 304 aaKnown RBP19.39■□□□□ 0.69
CCDC9-205ENST00000600117 KLHL11Q9NVR0 708 aa19.39■□□□□ 0.69
CCDC9-205ENST00000600117 CWC15Q9P013 229 aaKnown RBP19.39■□□□□ 0.69
CCDC9-205ENST00000600117 FASNP49327 2511 aaKnown RBP19.39■□□□□ 0.69
CCDC9-205ENST00000600117 TRIM24O15164 1050 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 LUC7L3O95232 432 aaKnown RBP19.38■□□□□ 0.69
CCDC9-205ENST00000600117 FTCDO95954 541 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 RETP07949 1114 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 RHOQP17081 205 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 GOT1P17174 413 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 CTNNA2P26232 953 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 HTR7P34969 479 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 ZNF135P52742 658 aaPredicted RBP19.38■□□□□ 0.69
CCDC9-205ENST00000600117 CDH4P55283 916 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 CDH6P55285 790 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 AMPD2Q01433 879 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 PPP6R3Q5H9R7 873 aaPredicted RBP19.38■□□□□ 0.69
CCDC9-205ENST00000600117 MAMSTRQ6ZN01 415 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 NLRP14Q86W24 1093 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 RAPGEF5Q92565 580 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 KRT35Q92764 455 aa19.38■□□□□ 0.69
CCDC9-205ENST00000600117 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.37■□□□□ 0.69
CCDC9-205ENST00000600117 C3orf70A6NLC5 250 aaPredicted RBP19.37■□□□□ 0.69
CCDC9-205ENST00000600117 EEF2KO00418 725 aaKnown RBP19.37■□□□□ 0.69
CCDC9-205ENST00000600117 CLDN11O75508 207 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 CD48P09326 243 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 TNNT1P13805 278 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 IL4RP24394 825 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 EPHB2P29323 1055 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 CTNNA1P35221 906 aaKnown RBP19.37■□□□□ 0.69
CCDC9-205ENST00000600117 HCAR3P49019 387 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 GALK1P51570 392 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 TPI1P60174 286 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 DPYSL3Q14195 570 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 LPAL2Q16609 132 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 FSCBQ5H9T9 825 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 TMEM196Q5HYL7 178 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 CXorf57Q6NSI4 855 aaKnown RBP19.37■□□□□ 0.69
CCDC9-205ENST00000600117 RWDD4Q6NW29 188 aaKnown RBP19.37■□□□□ 0.69
CCDC9-205ENST00000600117 RFX8Q6ZV50 586 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 KIAA0907Q7Z7F0 614 aaPredicted RBP19.37■□□□□ 0.69
CCDC9-205ENST00000600117 MFN1Q8IWA4 741 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 CARNMT1Q8N4J0 409 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCDC9-205ENST00000600117 OR52K2Q8NGK3 314 aa19.37■□□□□ 0.69
CCDC9-205ENST00000600117 FIBINQ8TAL6 211 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms