RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 CD6P30203 668 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 RFC1P35251 1148 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 HOXD12P35452 270 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 CTSOP43234 321 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 VASPP50552 380 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 TPMTP51580 245 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 CDH4P55283 916 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 HDAC4P56524 1084 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 RPS14P62263 151 aaKnown RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 ATP11AP98196 1134 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 ECT2LQ008S8 904 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 NRG1Q02297 640 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 ZBTB16Q05516 673 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SULT2A1Q06520 285 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 PUM1Q14671 1186 aaKnown RBP eCLIP8.21□□□□□ -1.12e-7■■■□□ 17.1
CHMP2A-205ENST00000600006 CDO1Q16878 200 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 RSPO4Q2I0M5 234 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 C15orf59Q2T9L4 293 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 RAB6CQ53S08 254 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 ALFQ53S48 1182 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 PPP1R15BQ5SWA1 713 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 MANEALQ5VSG8 457 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SFMBT2Q5VUG0 894 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SPECC1LQ69YQ0 1117 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 TCEAL6Q6IPX3 200 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 ACAD10Q6JQN1 1059 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 PPP1R2P3Q6NXS1 205 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 DNAJC24Q6P3W2 148 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 ARMCX6Q7L4S7 300 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 PHLDB2Q86SQ0 1253 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 CACUL1Q86Y37 369 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SYT12Q8IV01 421 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SLC41A1Q8IVJ1 513 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 MCOLN2Q8IZK6 566 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 CENPIQ92674 756 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 TCEAL3Q969E4 200 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 NTAN1Q96AB6 310 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 MRFAP1L1Q96HT8 127 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 VCPIP1Q96JH7 1222 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 PPP1R9BQ96SB3 815 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SELENOOQ9BVL4 669 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SIK2Q9H0K1 926 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 RAB6CQ9H0N0 254 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 RSPH9Q9H1X1 276 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SMOC1Q9H4F8 434 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 MTG2Q9H4K7 406 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 WSB2Q9NYS7 404 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 ZNF212Q9UDV6 495 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SUN2Q9UH99 717 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 EVLQ9UI08 416 aaPredicted RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 CDV3Q9UKY7 258 aaKnown RBP8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SNX10Q9Y5X0 201 aa8.21□□□□□ -1.1
CHMP2A-205ENST00000600006 SPTBN4Q9H254 2564 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 CFAP54Q96N23 3096 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 EDDM13A0A1B0GTR0 161 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 LNP1A1A4G5 178 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 TARSL2A2RTX5 802 aaKnown RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 GOLGA6L3A6NEY3 463 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 TTC34A8MYJ7 566 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 PATE3B3GLJ2 98 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 E9PAM4 449 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 SLC30A4O14863 429 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 CCP110O43303 1012 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 GDF9O60383 454 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 DNTTP04053 509 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 RHOCP08134 193 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ACADMP11310 421 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 TNFAIP3P21580 790 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ITPKAP23677 461 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 RRM1P23921 792 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 OXTRP30559 389 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ADRA1BP35368 520 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 STK19P49842 368 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ZNF143P52747 638 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ZNF33AQ06730 810 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 SCAPQ12770 1279 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ARL13BQ3SXY8 428 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 AASDHQ4L235 1098 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 C9orf64Q5T6V5 341 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 SH3PXD2AQ5TCZ1 1133 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 RNF219Q5W0B1 726 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ZNF776Q68DI1 518 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 WDR59Q6PJI9 974 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 LRRC31Q6UY01 552 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ERMP1Q7Z2K6 904 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ZNF571Q7Z3V5 609 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 SETD3Q86TU7 594 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 VSTM4Q8IW00 320 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 DCAF4L2Q8NA75 395 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 CADM4Q8NFZ8 388 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 FAM172AQ8WUF8 416 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 PIGKQ92643 395 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 TOE1Q96GM8 510 aaKnown RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 ZNF419Q96HQ0 510 aaPredicted RBP8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 HSPA12BQ96MM6 686 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 MCEEQ96PE7 176 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 PSMB7Q99436 277 aa8.2□□□□□ -1.1
CHMP2A-205ENST00000600006 FEM1AQ9BSK4 669 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms