RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 UGT2A3Q6UWM9 527 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 CD300LGQ6UXG3 332 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 CLEC20AQ6ZU45 233 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 OTOAQ7RTW8 1153 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 PATL1Q86TB9 770 aaKnown RBP15.77■□□□□ 0.11
PNKP-204ENST00000594661 HASPINQ8TF76 798 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 LINC01599Q8WXQ3 324 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 NDRG1Q92597 394 aaKnown RBP15.77■□□□□ 0.11
PNKP-204ENST00000594661 MED10Q9BTT4 135 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 GPATCH2LQ9NWQ4 482 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 KANSL3Q9P2N6 904 aa15.77■□□□□ 0.11
PNKP-204ENST00000594661 TDRKHQ9Y2W6 561 aaKnown RBP15.77■□□□□ 0.11
PNKP-204ENST00000594661 MYBPHLA2RUH7 354 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 B3GAT3O94766 335 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 BRCC3P46736 316 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 LHX1P48742 406 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 RABGGTBP53611 331 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 CDH6P55285 790 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 SCYL2Q6P3W7 929 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 BORAQ6PGQ7 559 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 C11orf84Q9BUA3 381 aaPredicted RBP15.76■□□□□ 0.11
PNKP-204ENST00000594661 RGS18Q9NS28 235 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 CCDC162PA2VCL2 907 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 F8W810 466 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 MATN2O00339 956 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 ENDOD1O94919 500 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 TFAP2AP05549 437 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 PGM1P36871 562 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 SCNN1AP37088 669 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 ATXN1P54253 815 aaKnown RBP15.76■□□□□ 0.11
PNKP-204ENST00000594661 GDF10P55107 478 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 RELAQ04206 551 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 NR1H3Q13133 447 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 TUSC3Q13454 348 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 RNASEH2BQ5TBB1 312 aaKnown RBP15.76■□□□□ 0.11
PNKP-204ENST00000594661 FYB2Q5VWT5 728 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 FAM91A1Q658Y4 838 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 NANOGNBQ7Z5D8 188 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 CEP70Q8NHQ1 597 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 RSAD2Q8WXG1 361 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 MAML1Q92585 1016 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 ITPKCQ96DU7 683 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 PCED1BQ96HM7 432 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 RTP3Q9BQQ7 232 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 CCDC77Q9BR77 488 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 HEY1Q9Y5J3 304 aa15.76■□□□□ 0.11
PNKP-204ENST00000594661 C9IYK1 514 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 ARVCFO00192 962 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 ITGB1P05556 798 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 PTPN9P43378 593 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 MAP3K7CLP57077 242 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 ACTR3P61158 418 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 DPYSL3Q14195 570 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 STAT4Q14765 748 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 PLEKHG4Q58EX7 1191 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 HP1BP3Q5SSJ5 553 aaPredicted RBP15.75■□□□□ 0.11
PNKP-204ENST00000594661 FAM35AQ86V20 835 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 RASSF3Q86WH2 238 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 LRRC6Q86X45 466 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.75■□□□□ 0.11
PNKP-204ENST00000594661 VPS50Q96JG6 964 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 MAK16Q9BXY0 300 aaKnown RBP15.75■□□□□ 0.11
PNKP-204ENST00000594661 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.75■□□□□ 0.11
PNKP-204ENST00000594661 TMEM30AQ9NV96 361 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 PLK2Q9NYY3 685 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 TBK1Q9UHD2 729 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 GRID1Q9ULK0 1009 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 SHOC2Q9UQ13 582 aa15.75■□□□□ 0.11
PNKP-204ENST00000594661 RASA4BC9J798 803 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 APOC4-APOC2K7ER74 178 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 RASA4O43374 803 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 B4GALT3O60512 393 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 APOC2P02655 101 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 ODC1P11926 461 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 VCLP18206 1134 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 NDUFV1P49821 464 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 EIF3EP60228 445 aaKnown RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 MSLNQ13421 630 aaPredicted RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 PDK3Q15120 406 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 CA9Q16790 459 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 SYCP2LQ5T4T6 812 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 RAPH1Q70E73 1250 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 TTC25Q96NG3 672 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 SNRNP25Q9BV90 132 aaKnown RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 FAM32AQ9Y421 112 aaKnown RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 HBS1LQ9Y450 684 aaKnown RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 TRIM17Q9Y577 477 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 CFAP69A5D8W1 941 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 GOLGA8MH3BSY2 632 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 MCF2LO15068 1137 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 LSM1O15116 133 aaKnown RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 FKBP6O75344 327 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 PGM3O95394 542 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 ABHD2P08910 425 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 PFKPQ01813 784 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 FASTKD3Q14CZ7 662 aaKnown RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 ANKRD20A4Q4UJ75 823 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 CLLU1OSQ5K130 101 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 SLC2A7Q6PXP3 512 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 ARCQ7LC44 396 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms