RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 SRPRAP08240 638 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 LCP1P13796 627 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 C5AR1P21730 350 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 SLC8A1P32418 973 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 NUDT1P36639 197 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 DAOAP59103 153 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 HSP90AA4PQ58FG1 418 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 RFWD3Q6PCD5 774 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 SND1Q7KZF4 910 aaKnown RBP eCLIP11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 BHLHA9Q7RTU4 235 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 GATAD2AQ86YP4 633 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 MMAAQ8IVH4 418 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 TRIM59Q8IWR1 403 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 UBA3Q8TBC4 463 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 PIP4K2CQ8TBX8 421 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 SAP25Q8TEE9 199 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 SLC6A18Q96N87 628 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 SERPINB11Q96P15 392 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 BBC3Q96PG8 261 aaPredicted RBP11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 ORAI3Q9BRQ5 295 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 TRIM62Q9BVG3 475 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 NEUROG2Q9H2A3 272 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 ERVMER34-1Q9H9K5 563 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 PLXNB3Q9ULL4 1909 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 CKAP5Q14008 2032 aa11.11□□□□□ -0.63
CSNK1D-226ENST00000585026 ITIH6Q6UXX5 1313 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 A0A1W2PP55 124 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 CAPN8A6NHC0 703 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 O00370 1275 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 CAPN9O14815 690 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 MID1O15344 667 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 SART1O43290 800 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 IGLV3-27P01718 113 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 LTFP02788 710 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 TPM2P07951 284 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 PAEPP09466 180 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 GOT1P17174 413 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 EIF2S3P41091 472 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 CSKP41240 450 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 GSDMDP57764 484 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 SEMG2Q02383 582 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 OVGP1Q12889 678 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 MAN2A1Q16706 1144 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 VWA3BQ502W6 1294 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 DCAF17Q5H9S7 520 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 KCNT1Q5JUK3 1230 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 MIIPQ5JXC2 388 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 SPECC1LQ69YQ0 1117 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 LCLAT1Q6UWP7 414 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 PRPF39Q86UA1 669 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 CARNMT1Q8N4J0 409 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 EID2Q8N6I1 236 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 OR14C36Q8NHC7 312 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 SERAC1Q96JX3 654 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 HSFY1Q96LI6 401 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 COQ4Q9Y3A0 265 aa11.1□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3DA0A087WVF3 549 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3IA0A087WXS9 549 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3EA0A087X179 549 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3KA0A087X1G2 549 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 GOLGA6L7A0A1B0GV03 622 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3FA6NER0 549 aaPredicted RBP11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3LB9A6J9 549 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TLR4O00206 839 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 ATXN7O15265 892 aaPredicted RBP11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TEX33O43247 280 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 APOEP02649 317 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3HP0C7X1 549 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 EPHA8P29322 1005 aaPredicted RBP11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 ACTN2P35609 894 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 MTIF2P46199 727 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 RXRGP48443 463 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 SGSHP51688 502 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 OXCT1P55809 520 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 ECT2LQ008S8 904 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 SULT2A1Q06520 285 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 CETN1Q12798 172 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TARDBPQ13148 414 aaKnown RBP eCLIP11.09□□□□□ -0.633e-6■■■■□ 20.8
CSNK1D-226ENST00000585026 NNTQ13423 1086 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 SLC12A1Q13621 1099 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 ELAVL3Q14576 367 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 RTP5Q14D33 572 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 CNGA2Q16280 664 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 PKDCCQ504Y2 493 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 FAM133BQ5BKY9 247 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 PITRM1Q5JRX3 1037 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 PRAMEF14Q5SWL7 426 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 C9orf64Q5T6V5 341 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 HES3Q5TGS1 186 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3GQ6DHY5 549 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3CQ6IPX1 549 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 NAPEPLDQ6IQ20 393 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 DSG4Q86SJ6 1040 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 IQCHQ86VS3 1027 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 DRC7Q8IY82 874 aa11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 TBC1D3Q8IZP1 549 aaPredicted RBP11.09□□□□□ -0.63
CSNK1D-226ENST00000585026 CACTIN-AS1Q8N1I8 211 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms