RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	KCNK13	Q9HB14	408 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ACSS2	Q9NR19	701 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	TAS2R1	Q9NYW7	299 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	STRIP2	Q9ULQ0	834 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	EFR3B	Q9Y2G0	817 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ANGPTL3	Q9Y5C1	460 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	TCRBV9S1A1T	A0A576	114 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	TRIM49D1	C9J1S8	452 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063		H7C0C1	242 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ACKR2	O00590	384 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	HDAC3	O15379	428 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	GSC2	O15499	205 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	SORBS2	O94875	1100 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	CALB1	P05937	261 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ABHD2	P08910	425 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MIP	P30301	263 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PHKA2	P46019	1235 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ATP5O	P48047	213 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MRPS5	P82675	430 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PEX6	Q13608	980 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PRPF38B	Q5VTL8	546 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	XYLT1	Q86Y38	959 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	SLC35B2	Q8TB61	432 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	OSMR	Q99650	979 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	HES2	Q9Y543	173 aa		11.89	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063		B2RBV5	119 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063		M0QYV0	167 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	SCAMP3	O14828	347 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	NVL	O15381	856 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MAGEB2	O15479	319 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	AOC2	O75106	756 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PGK1	P00558	417 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	GALNS	P34059	522 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	HADHA	P40939	763 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	GJA9	P57773	515 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	B2M	P61769	119 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	CRADD	P78560	199 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MCL1	Q07820	350 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MAP7	Q14244	749 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	C21orf62-AS1	Q17RA5	79 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PARP6	Q2NL67	630 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	FAM47C	Q5HY64	1035 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	EFHC2	Q5JST6	749 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ZNF484	Q5JVG2	852 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MROH9	Q5TGP6	573 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	BSPRY	Q5W0U4	402 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	IQSEC1	Q6DN90	963 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	STRA8	Q7Z7C7	330 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	GALNT5	Q7Z7M9	940 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	TREML1	Q86YW5	311 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PPIL6	Q8IXY8	311 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PDIK1L	Q8N165	341 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	BANP	Q8N9N5	519 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	SLC4A11	Q8NBS3	891 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	C2orf40	Q9H1Z8	148 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	CDHR5	Q9HBB8	845 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PCDH9	Q9HC56	1237 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	CYLD	Q9NQC7	956 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	GIMAP2	Q9UG22	337 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PACSIN3	Q9UKS6	424 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MAD1L1	Q9Y6D9	718 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	IGKV6-21	A0A0C4DH24	114 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	CCDC85C	A6NKD9	419 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	C2CD2L	O14523	706 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	FCHO1	O14526	889 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PPEF2	O14830	753 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MICAL2	O94851	1124 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	INHBA	P08476	426 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	CDK4	P11802	303 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	TFE3	P19532	575 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	KDELR1	P24390	212 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	POLE2	P56282	527 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	HTRA3	P83110	453 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	MBTD1	Q05BQ5	628 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	GNAS	Q5JWF2	1037 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ZPBP2	Q6X784	338 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	KBTBD2	Q8IY47	623 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	POU5F2	Q8N7G0	328 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ALKBH8	Q96BT7	664 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	SNX27	Q96L92	541 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	C20orf27	Q9GZN8	174 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	AP5M1	Q9H0R1	490 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	BATF3	Q9NR55	127 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	RAB6B	Q9NRW1	208 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ATAD3A	Q9NVI7	634 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ZIM2	Q9NZV7	527 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	HESX1	Q9UBX0	185 aa		11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ARF4	P18085	180 aa	Predicted RBP	11.87	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	CTGF	P29279	349 aa		11.87	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	POLR2B	P30876	1174 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ATXN1	P54253	815 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	CDH6	P55285	790 aa		11.87	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	PHEX	P78562	749 aa		11.87	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	ROR2	Q01974	943 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-231	ENST00000584063	AMHR2	Q16671	573 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms