RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 ELAVL4P26378 380 aaKnown RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 ADORA2BP29275 332 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 SLC8A1P32418 973 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ATP5C1P36542 298 aaKnown RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 CLDN2P57739 230 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 TAS2R38P59533 333 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 MYL6P60660 151 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ZBTB16Q05516 673 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ZNF177Q13360 481 aaPredicted RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 MORC3Q14149 939 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 DEFB133Q30KQ1 61 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 HNRNPA1L2Q32P51 320 aaKnown RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 TTC31Q49AM3 519 aaPredicted RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 OR6B2Q6IFH4 312 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 CAPRIN2Q6IMN6 1127 aaKnown RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 GCNT7Q6ZNI0 430 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 RBM44Q6ZP01 1051 aaKnown RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 CLEC20AQ6ZU45 233 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ZNF720Q7Z2F6 126 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 TMPRSS9Q7Z410 1059 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 TRIM46Q7Z4K8 759 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 C14orf80Q86SX3 495 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ACOT1Q86TX2 421 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 DTX1Q86Y01 620 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 JAMLQ86YT9 394 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 STK40Q8N2I9 435 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ARL14Q8N4G2 192 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.3□□□□□ -1.72
CTC1-209ENST00000581729 C12orf29Q8N999 325 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 MFSD2AQ8NA29 543 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ZNF548Q8NEK5 533 aaPredicted RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 WDR36Q8NI36 951 aaKnown RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 SLC2A14Q8TDB8 520 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 SSC4DQ8WTU2 575 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 WASF1Q92558 559 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 NDRG1Q92597 394 aaKnown RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 FAM131CQ96AQ9 280 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 PPP1R13BQ96KQ4 1090 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 SPSB2Q99619 263 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 MED10Q9BTT4 135 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 SLC12A9Q9BXP2 914 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 TM6SF1Q9BZW5 370 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ABCG4Q9H172 646 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 SNX25Q9H3E2 840 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 KDM4CQ9H3R0 1056 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ST6GALNAC4Q9H4F1 302 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 SYNDIG1Q9H7V2 258 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 EPB41L5Q9HCM4 733 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 CSNK1G1Q9HCP0 422 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.3□□□□□ -1.721e-6■■■■■ 83.3
CTC1-209ENST00000581729 TLR8Q9NR97 1041 aaKnown RBP4.3□□□□□ -1.72
CTC1-209ENST00000581729 TMPRSS4Q9NRS4 437 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 NLGN3Q9NZ94 848 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 EHD2Q9NZN4 543 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 CYTH4Q9UIA0 394 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 SLCO3A1Q9UIG8 710 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 NAGPAQ9UK23 515 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 ODF2LQ9ULJ1 636 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 SCML2Q9UQR0 700 aa4.3□□□□□ -1.72
CTC1-209ENST00000581729 MYH10P35580 1976 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 SDK2Q58EX2 2172 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 TBC1D3DA0A087WVF3 549 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 TBC1D3IA0A087WXS9 549 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 TBC1D3EA0A087X179 549 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 TBC1D3KA0A087X1G2 549 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 CCDC187A0A096LP49 1063 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 A0A1W2PQM1 296 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 SLC12A8A0AV02 714 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 EME2A4GXA9 379 aaPredicted RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 TBC1D3FA6NER0 549 aaPredicted RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 TBC1D3LB9A6J9 549 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 NTN3O00634 580 aaPredicted RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 SCAMP1O15126 338 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 SLC31A1O15431 190 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 SPINT1O43278 529 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 MSI1O43347 362 aaKnown RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 ACTN4O43707 911 aaKnown RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 DUX1O43812 170 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 GCATO75600 419 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 TBC1D3HP0C7X1 549 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 LIPCP11150 499 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 MZF1P28698 734 aaPredicted RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 GJB2P29033 226 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 SLC6A4P31645 630 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 CSKP41240 450 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 PLA2G4AP47712 749 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 CASP4P49662 377 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 STK19P49842 368 aaPredicted RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 POU5F1Q01860 360 aaKnown RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 ARID5AQ03989 594 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 ORC2Q13416 577 aaPredicted RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 FGL2Q14314 439 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 TCEA2Q15560 299 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 WDR72Q3MJ13 1102 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 FSCBQ5H9T9 825 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 MANEAQ5SRI9 462 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 L1TD1Q5T7N2 865 aaKnown RBP4.29□□□□□ -1.72
CTC1-209ENST00000581729 ATP1A1-AS1Q5TC04 95 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 AGBL4Q5VU57 503 aa4.29□□□□□ -1.72
CTC1-209ENST00000581729 ZNF385CQ66K41 422 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms