RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 MYLK2Q9H1R3 596 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 FOXP1Q9H334 677 aaPredicted RBP5.84□□□□□ -1.47
NUP88-213ENST00000576862 AAMDCQ9H7C9 122 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 SPAG4Q9NPE6 437 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 PCDHA12Q9UN75 941 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 SLC8A2Q9UPR5 921 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 SCRIBQ14160 1630 aa5.84□□□□□ -1.47
NUP88-213ENST00000576862 NPIPB13A6NJU9 1138 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 NPIPB5A8MRT5 1133 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 B9A039 149 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 NPIPB4C9JG80 1138 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 RHODO00212 210 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 HNRNPRO43390 633 aaKnown RBP5.83□□□□□ -1.48
NUP88-213ENST00000576862 KRT38O76015 456 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 NFATC1O95644 943 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 TMEM191BP0C7N4 346 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 ACP5P13686 325 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 ME1P48163 572 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 RHAGQ02094 409 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 LAMB3Q13751 1172 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 DLGAP5Q15398 846 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 MTFR2Q6P444 385 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 SLC30A9Q6PML9 568 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 MOGAT3Q86VF5 341 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 THAP4Q8WY91 577 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 RUBCNQ92622 972 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 TBC1D20Q96BZ9 403 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 HMCESQ96FZ2 354 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 VCPIP1Q96JH7 1222 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 CLMNQ96JQ2 1002 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 HERC2P3Q9BVR0 1158 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 PLEKHA2Q9HB19 425 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 SEMA4BQ9NPR2 832 aaPredicted RBP5.83□□□□□ -1.48
NUP88-213ENST00000576862 BAG5Q9UL15 447 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 COG5Q9UP83 839 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 TNFSF13BQ9Y275 285 aa5.83□□□□□ -1.48
NUP88-213ENST00000576862 DPPA5A6NC42 116 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 A6NNC1 897 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 FOXO6A8MYZ6 492 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 NEURL1O76050 574 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 TFRCP02786 760 aaKnown RBP5.82□□□□□ -1.48
NUP88-213ENST00000576862 DHRS4L1P0CG22 281 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 HOXB9P17482 250 aaPredicted RBP5.82□□□□□ -1.48
NUP88-213ENST00000576862 PLCD1P51178 756 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 TAF5Q15542 800 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 TWIST1Q15672 202 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 GPR162Q16538 588 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 LRCH2Q5VUJ6 765 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 MMP21Q8N119 569 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 CCT6BQ92526 530 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 GOLGA1Q92805 767 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 SDCCAG3Q96C92 435 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 KTI12Q96EK9 354 aaPredicted RBP5.82□□□□□ -1.48
NUP88-213ENST00000576862 WDR83Q9BRX9 315 aaKnown RBP5.82□□□□□ -1.48
NUP88-213ENST00000576862 ZNF304Q9HCX3 659 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 TMLHEQ9NVH6 421 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 KIF17Q9P2E2 1029 aa5.82□□□□□ -1.48
NUP88-213ENST00000576862 MORC2Q9Y6X9 1032 aaPredicted RBP5.82□□□□□ -1.48
NUP88-213ENST00000576862 RB1CC1Q8TDY2 1594 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 MSI1O43347 362 aaKnown RBP5.81□□□□□ -1.48
NUP88-213ENST00000576862 EPN2O95208 641 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 CSF1P09603 554 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 PKMP14618 531 aaKnown RBP5.81□□□□□ -1.48
NUP88-213ENST00000576862 AVPR2P30518 371 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 CIITAP33076 1130 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 HALP42357 657 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 GALNT3Q14435 633 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 INPP5JQ15735 1006 aaPredicted RBP5.81□□□□□ -1.48
NUP88-213ENST00000576862 LEXMQ3ZCV2 418 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 CYB5R4Q7L1T6 521 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 ANKS1BQ7Z6G8 1248 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 KLBQ86Z14 1044 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 SCN4BQ8IWT1 228 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 TMEM217Q8N7C4 229 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 Q8N9P0 234 aaPredicted RBP5.81□□□□□ -1.48
NUP88-213ENST00000576862 SPPL3Q8TCT6 385 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 KCNJ9Q92806 393 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 FAM167BQ9BTA0 163 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 CLPBQ9H078 707 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 PPCSQ9HAB8 311 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 ITM2CQ9NQX7 267 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 TMEM248Q9NWD8 314 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 ARL15Q9NXU5 204 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 PCDHGB3Q9Y5G1 929 aa5.81□□□□□ -1.48
NUP88-213ENST00000576862 TCRBV7S3A2A0A539 114 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 NDUFB8O95169 186 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 TK1P04183 234 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 IGKV2-30P06310 120 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 CHRNB1P11230 501 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 RBM5P52756 815 aaKnown RBP eCLIP5.8□□□□□ -1.48
NUP88-213ENST00000576862 HNRNPA0Q13151 305 aaKnown RBP5.8□□□□□ -1.48
NUP88-213ENST00000576862 ZNF484Q5JVG2 852 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 C6orf10Q5SRN2 563 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 LDHAL6AQ6ZMR3 332 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 B4GALNT4Q76KP1 1039 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 RNF144BQ7Z419 303 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 FSIP1Q8NA03 581 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 SPATA5Q8NB90 893 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms