RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ATL3Q6DD88 541 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 IGF2-ASQ6U949 168 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 TRIM69Q86WT6 500 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 AADATQ8N5Z0 425 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 FAM181AQ8N9Y4 354 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 OR4C6Q8NH72 309 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 WFDC5Q8TCV5 224 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 NDRG1Q92597 394 aaKnown RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 TATDN2Q93075 761 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 MED8Q96G25 268 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 KLHDC7BQ96G42 594 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 PAGE5Q96GU1 130 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 NAF1Q96HR8 494 aaKnown RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 SERPINB11Q96P15 392 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 MMRN2Q9H8L6 949 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 KLHL11Q9NVR0 708 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 NCKIPSDQ9NZQ3 722 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 ARHGAP20Q9P2F6 1191 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 CYTH4Q9UIA0 394 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 MYO9AB2RTY4 2548 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 GOLGA4Q13439 2230 aaKnown RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 HELZP42694 1942 aaKnown RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 PTPRQQ9UMZ3 2332 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 CABIN1Q9Y6J0 2220 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 GOLGA6L7A0A1B0GV03 622 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 TULP2O00295 520 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 SART1O43290 800 aaKnown RBP9.3□□□□□ -0.92
SMG6-218ENST00000575454 USP12O75317 370 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 FBXO21O94952 628 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 WISP1O95388 367 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 MPOP05164 745 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 LCP1P13796 627 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 CD19P15391 556 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 DGKAP23743 735 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 RBMS1P29558 406 aaKnown RBP9.3□□□□□ -0.92
SMG6-218ENST00000575454 SLC6A4P31645 630 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 VASPP50552 380 aaPredicted RBP9.3□□□□□ -0.92
SMG6-218ENST00000575454 DAOAP59103 153 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 RPS24P62847 133 aaKnown RBP9.3□□□□□ -0.92
SMG6-218ENST00000575454 NUCB2P80303 420 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 MS4A13Q5J8X5 152 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 NEK5Q6P3R8 708 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 XKR5Q6UX68 686 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 GRAMD1CQ8IYS0 662 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 STK40Q8N2I9 435 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 SLC25A45Q8N413 288 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 FAM174AQ8TBP5 190 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 OR8D1Q8WZ84 308 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 PTPRN2Q92932 1015 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 FAM131CQ96AQ9 280 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 TRIM62Q9BVG3 475 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 DUSP23Q9BVJ7 150 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 CPNE5Q9HCH3 593 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 PREBQ9HCU5 417 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 TJP2Q9UDY2 1190 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 SERTAD1Q9UHV2 236 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 SLCO3A1Q9UIG8 710 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 INTS6Q9UL03 887 aaKnown RBP9.3□□□□□ -0.92
SMG6-218ENST00000575454 CFAP45Q9UL16 551 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 PCDHA7Q9UN72 937 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 TLR6Q9Y2C9 796 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 PCDHB1Q9Y5F3 818 aa9.3□□□□□ -0.92
SMG6-218ENST00000575454 PLXNB3Q9ULL4 1909 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 C1QTNF3-AMACRE9PGA6 284 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 PLRG1O43660 514 aaKnown RBP9.29□□□□□ -0.92
SMG6-218ENST00000575454 SLC28A2O43868 658 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 SDC3O75056 442 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 LUC7L3O95232 432 aaKnown RBP9.29□□□□□ -0.92
SMG6-218ENST00000575454 LTFP02788 710 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 ZNF18P17022 549 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 MAT2AP31153 395 aaKnown RBP9.29□□□□□ -0.92
SMG6-218ENST00000575454 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
SMG6-218ENST00000575454 CTSOP43234 321 aaPredicted RBP9.29□□□□□ -0.92
SMG6-218ENST00000575454 PPP2CBP62714 309 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 PPP2CAP67775 309 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 KCNMA1Q12791 1236 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 CUL2Q13617 745 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 STILQ15468 1287 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 DCAF6Q58WW2 860 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 LCLAT1Q6UWP7 414 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 TPCN2Q8NHX9 752 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 UBA3Q8TBC4 463 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 TTC9Q92623 222 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 SEMA4DQ92854 862 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 HSFY1Q96LI6 401 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 PRICKLE1Q96MT3 831 aaPredicted RBP9.29□□□□□ -0.92
SMG6-218ENST00000575454 SRRTQ9BXP5 876 aaKnown RBP9.29□□□□□ -0.92
SMG6-218ENST00000575454 NLGN3Q9NZ94 848 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 SLC12A6Q9UHW9 1150 aa9.29□□□□□ -0.92
SMG6-218ENST00000575454 MYO18AQ92614 2054 aaKnown RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 UBR5O95071 2799 aaPredicted RBP9.28□□□□□ -0.92
SMG6-218ENST00000575454 A0A1B0GVM2 712 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 K7ENP7 123 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 O00370 1275 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 SCAMP1O15126 338 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 CETN3O15182 167 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 ALOX15BO15296 676 aa9.28□□□□□ -0.92
SMG6-218ENST00000575454 ACTN4O43707 911 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms