RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 CBWD1Q9BRT8 395 aa7.14□□□□□ -1.27
CNEP1R1-204ENST00000562576 RSPH9Q9H1X1 276 aaPredicted RBP7.14□□□□□ -1.27
CNEP1R1-204ENST00000562576 SNX25Q9H3E2 840 aa7.14□□□□□ -1.27
CNEP1R1-204ENST00000562576 BRMS1Q9HCU9 246 aa7.14□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D7Q9P0N9 293 aa7.14□□□□□ -1.27
CNEP1R1-204ENST00000562576 PRRC2CQ9Y520 2896 aaKnown RBP7.14□□□□□ -1.27
CNEP1R1-204ENST00000562576 PCDHGC4Q9Y5F7 938 aa7.14□□□□□ -1.27
CNEP1R1-204ENST00000562576 PCDHGA8Q9Y5G5 932 aa7.14□□□□□ -1.27
CNEP1R1-204ENST00000562576 K7ESM1 405 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 CDC45O75419 566 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 RTN3O95197 1032 aaPredicted RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 KRT7P08729 469 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 CCDC130P13994 396 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 PRF1P14222 555 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 VAV1P15498 845 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 HOXB4P17483 251 aaPredicted RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 ELAVL4P26378 380 aaKnown RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 HOXD9P28356 352 aaPredicted RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 CORO1AP31146 461 aaKnown RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 SLC8A1P32418 973 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 CD70P32970 193 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 ATP5C1P36542 298 aaKnown RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 ETV5P41161 510 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 AFMP43652 599 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 TUBP50607 506 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 ZNF131P52739 623 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 MAP3K7CLP57077 242 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 CTBSQ01459 385 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 MCM6Q14566 821 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 BMP2KLQ5H9B9 411 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 C10orf120Q5SQS8 335 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 C9orf64Q5T6V5 341 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 KRT79Q5XKE5 535 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 ZNF776Q68DI1 518 aaPredicted RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 EFL1Q7Z2Z2 1120 aaKnown RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 JAMLQ86YT9 394 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 FUKQ8N0W3 1084 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 MFSD2AQ8NA29 543 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 B3GALNT2Q8NCR0 500 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 PDZD8Q8NEN9 1154 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 OR2T34Q8NGX1 318 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 OR14C36Q8NHC7 312 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 DDI1Q8WTU0 396 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 OVCA2Q8WZ82 227 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 KCNN1Q92952 543 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 GTF3C6Q969F1 213 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 FAM129BQ96TA1 746 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 MED10Q9BTT4 135 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 TIPINQ9BVW5 301 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 FOXP3Q9BZS1 431 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 ELOVL4Q9GZR5 314 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 SDCBP2Q9H190 292 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 SMYD3Q9H7B4 428 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 FZD3Q9NPG1 666 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 BLOC1S4Q9NUP1 217 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 ABCB8Q9NUT2 735 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 INTS13Q9NVM9 706 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 RBAKQ9NYW8 714 aaPredicted RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 EHD2Q9NZN4 543 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 LARSQ9P2J5 1176 aaKnown RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 LSM7Q9UK45 103 aaKnown RBP7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 ITGA11Q9UKX5 1188 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 MED13Q9UHV7 2174 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 LRRK1Q38SD2 2015 aa7.13□□□□□ -1.27
CNEP1R1-204ENST00000562576 MTORP42345 2549 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D3DA0A087WVF3 549 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D3IA0A087WXS9 549 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D3EA0A087X179 549 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D3KA0A087X1G2 549 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D3FA6NER0 549 aaPredicted RBP7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 A8MXQ7 604 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TTC34A8MYJ7 566 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D3LB9A6J9 549 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 HHLA1C9JL84 531 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 NPC1O15118 1278 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 YKT6O15498 198 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 PIAS2O75928 621 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 FAM13AO94988 1023 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 AGFG2O95081 481 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D3HP0C7X1 549 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 PRLRP16471 622 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 UGT1A5P35504 534 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 DDIT3P35638 169 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 PLA2G4AP47712 749 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 PSMD8P48556 350 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 CCR5P51681 352 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 CASP5P51878 434 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 ADPRHP54922 357 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 POLE2P56282 527 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 CLDN2P57739 230 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 ARID5AQ03989 594 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 KCNAB2Q13303 367 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TLR1Q15399 786 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 MAPRE1Q15691 268 aaKnown RBP7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 CST6Q15828 149 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TMEM119Q4V9L6 283 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 HYIQ5T013 277 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 MBLAC2Q68D91 279 aa7.12□□□□□ -1.27
CNEP1R1-204ENST00000562576 TBC1D3GQ6DHY5 549 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms