RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 VN1R3Q9BXE9 311 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 XPO4Q9C0E2 1151 aaKnown RBP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 OSBPL5Q9H0X9 879 aaPredicted RBP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 ARHGEF3Q9NR81 526 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 HELLSQ9NRZ9 838 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 IGSF9Q9P2J2 1179 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 EPS15L1Q9UBC2 864 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 DKK3Q9UBP4 350 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.5□□□□□ -1.69
LRRC28-222ENST00000561431 STEAP1Q9UHE8 339 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 HS3ST4Q9Y661 456 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 NUP98P52948 1817 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 ABCC12Q96J65 1359 aa4.5□□□□□ -1.69
LRRC28-222ENST00000561431 TIAM2Q8IVF5 1701 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 MAP3K15Q6ZN16 1313 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 UBN2Q6ZU65 1347 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 SNED1Q8TER0 1413 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 ERVV-1B6SEH8 477 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 J3KRW8 73 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 TRIM38O00635 465 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 CES2O00748 559 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 FCHO1O14526 889 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 MPPED1O15442 326 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 PROM1O43490 865 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 ASNA1O43681 348 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 TMCC2O75069 709 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 URI1O94763 535 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 TNFRSF6BO95407 300 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 ERBB2P04626 1255 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 PRKCBP05771 671 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 ITGA2BP08514 1039 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 IL6RP08887 468 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 DLDP09622 509 aaKnown RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 EBLN1P0CF75 366 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 MYL6BP14649 208 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 MST1P26927 711 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 CASQ1P31415 396 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 AKT1P31749 480 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 GRK6P43250 576 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 PRELPP51888 382 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 SUMO2P61956 95 aaKnown RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 TAP1Q03518 808 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 SCAPQ12770 1279 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 PRKG1Q13976 671 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 PTPRRQ15256 657 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 TIGD6Q17RP2 521 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 FAM153CQ494X1 144 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 DNAJC21Q5F1R6 531 aaKnown RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 FNDC7Q5VTL7 733 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 KLHL17Q6TDP4 642 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 SIRT6Q8N6T7 355 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 CNBD1Q8NA66 436 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 MBD3L2Q8NHZ7 208 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 FAM71BQ8TC56 605 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 AFAP1L1Q8TED9 768 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 NEU4Q8WWR8 484 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 CENPTQ96BT3 561 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 CCDC34Q96HJ3 373 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 PBKQ96KB5 322 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 BRD8Q9H0E9 1235 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 SAGE1Q9NXZ1 904 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 XPO7Q9UIA9 1087 aaKnown RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 ST3GAL5Q9UNP4 418 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 SMC3Q9UQE7 1217 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 SLC27A6Q9Y2P4 619 aa4.49□□□□□ -1.69
LRRC28-222ENST00000561431 IBTKQ9P2D0 1353 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-222ENST00000561431 COL4A1P02462 1669 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 LAMB2P55268 1798 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 CACNA1SQ13698 1873 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 FER1L6Q2WGJ9 1857 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 PNMA6EA0A0J9YXQ4 647 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 A0A1B0GVC2 190 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 CCDC151A5D8V7 595 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 TMEM191CA6NGB0 347 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ADM5C9JUS6 153 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 J3KTA2 159 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 AP4M1O00189 453 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 ACKR2O00590 384 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 NPC1O15118 1278 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 NTSR2O95665 410 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 GLP2RO95838 553 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 AGR2O95994 175 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 HOXB7P09629 217 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 TMEM225BP0DP42 221 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 HSD3B1P14060 373 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 GLULP15104 373 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 CREB1P16220 341 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 NPPBP16860 134 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 DRD1P21728 446 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 SLC5A2P31639 672 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 CYP2C18P33260 490 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 UBA7P41226 1012 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 GSTM5P46439 218 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 POLE2P56282 527 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 TIRAPP58753 221 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 FSTL1Q12841 308 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 IFT88Q13099 833 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 PRKG2Q13237 762 aa4.48□□□□□ -1.69
LRRC28-222ENST00000561431 BFSP2Q13515 415 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms