RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ARFIP2P53365 341 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 PITX1P78337 314 aaPredicted RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 LPIN1Q14693 890 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 NFE2Q16621 373 aaPredicted RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 BSPRYQ5W0U4 402 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 KCTD11Q693B1 232 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 OVOS1Q6IE37 1185 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 TIGD7Q6NT04 549 aaPredicted RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 MSANTD2Q6P1R3 559 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 CD300LGQ6UXG3 332 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 TBC1D1Q86TI0 1168 aaPredicted RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 DCP1BQ8IZD4 617 aaKnown RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 ARHGAP18Q8N392 663 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.94□□□□□ -0.82
RTF1-206ENST00000560447 STKLD1Q8NE28 680 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 DQX1Q8TE96 717 aaKnown RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 DPF3Q92784 378 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 CERS2Q96G23 380 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 TEKT5Q96M29 485 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 ANKRD27Q96NW4 1050 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 TSEN34Q9BSV6 310 aaKnown RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 SMOC2Q9H3U7 446 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 TLE6Q9H808 572 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 AGO3Q9H9G7 860 aaKnown RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 RGS18Q9NS28 235 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 RNF19AQ9NV58 838 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 COMMD8Q9NX08 183 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 TXNDC16Q9P2K2 825 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 OR12D3Q9UGF7 316 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 ZFP69BQ9UJL9 534 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 AAR2Q9Y312 384 aaKnown RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 WDR27A2RRH5 827 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 CASTOR2A6NHX0 329 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 MEIS3P2A8K0S8 358 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 GOLGA8RI6L899 631 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 TIMM44O43615 452 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 CCDC22O60826 627 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 SNNO75324 88 aaPredicted RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 H2AFYO75367 372 aaKnown RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 ANXA9O76027 345 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 HAUS5O94927 633 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 MAP3K6O95382 1288 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 PGK1P00558 417 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 MPOP05164 745 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 APOA4P06727 396 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 DLDP09622 509 aaKnown RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 CTSHP09668 335 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 SLC2A3P11169 496 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 CCND1P24385 295 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 GRK2P25098 689 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 MGAT1P26572 445 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 PTPN4P29074 926 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 CTGFP29279 349 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 MAGEA11P43364 429 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 FLT3LGP49771 235 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 SERPINB8P50452 374 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 PRKAA2P54646 552 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 FAM189BP81408 668 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 OCRLQ01968 901 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 KCNC4Q03721 635 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 CACNB2Q08289 660 aaPredicted RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 KCNA10Q16322 511 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 CCDC153Q494R4 210 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 MANEALQ5VSG8 457 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 CASC4Q6P4E1 433 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 TRMT10BQ6PF06 316 aaKnown RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 GLB1LQ6UWU2 654 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 GPRIN1Q7Z2K8 1008 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 RNF180Q86T96 592 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 TAC4Q86UU9 113 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 CRLF3Q8IUI8 442 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 NUDCD3Q8IVD9 361 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 NDUFAF2Q8N183 169 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 MPP5Q8N3R9 675 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 ANKLE1Q8NAG6 615 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
RTF1-206ENST00000560447 RNF169Q8NCN4 708 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 URGCPQ8TCY9 931 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 PPP1R13LQ8WUF5 828 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 SREK1Q8WXA9 508 aaKnown RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 STON2Q8WXE9 905 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 NDRG1Q92597 394 aaKnown RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 LPPQ93052 612 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 SKA1Q96BD8 255 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 C1orf74Q96LT6 269 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 SERPINB11Q96P15 392 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 KCNK16Q96T55 309 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 KLF6Q99612 283 aaPredicted RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 ADAM2Q99965 735 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 FTHL17Q9BXU8 183 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 OXCT2Q9BYC2 517 aaPredicted RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 MAGEB5Q9BZ81 275 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 TKTL2Q9H0I9 626 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 WWP1Q9H0M0 922 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 NOD2Q9HC29 1040 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 MRM3Q9HC36 420 aaKnown RBP9.93□□□□□ -0.82
RTF1-206ENST00000560447 NPHS2Q9NP85 383 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 THAP1Q9NVV9 213 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 ZFATQ9P243 1243 aa9.93□□□□□ -0.82
RTF1-206ENST00000560447 VANGL2Q9ULK5 521 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms