RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	NXPH1	P58417	271 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	PITX1	P78337	314 aa	Predicted RBP	13	□□□□□ -0.33
LETMD1-231	ENST00000551931	SFSWAP	Q12872	951 aa	Known RBP	13	□□□□□ -0.33
LETMD1-231	ENST00000551931	ZC3H12A	Q5D1E8	599 aa	Known RBP	13	□□□□□ -0.33
LETMD1-231	ENST00000551931	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13	□□□□□ -0.33
LETMD1-231	ENST00000551931	CHSY1	Q86X52	802 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	OR14C36	Q8NHC7	312 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	PIP4K2C	Q8TBX8	421 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	CCDC34	Q96HJ3	373 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	SERAC1	Q96JX3	654 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	KREMEN1	Q96MU8	473 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	METTL14	Q9HCE5	456 aa	Known RBP	13	□□□□□ -0.33
LETMD1-231	ENST00000551931	GDF3	Q9NR23	364 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	CEP83	Q9Y592	693 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	ATP6V1D	Q9Y5K8	247 aa		13	□□□□□ -0.33
LETMD1-231	ENST00000551931	ASH1L	Q9NR48	2969 aa	Known RBP	12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931		E9PAM4	449 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	TLR4	O00206	839 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	LAT	O43561	262 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	TLX3	O43711	291 aa	Predicted RBP	12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	MOCS3	O95396	460 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	ADH1B	P00325	375 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	IL1B	P01584	269 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	IGLV3-25	P01717	112 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	JUP	P14923	745 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	C5AR1	P21730	350 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	ITPKB	P27987	946 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	BNIP3	Q12983	259 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	ELAVL3	Q14576	367 aa	Known RBP	12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	CCDC40	Q4G0X9	1142 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	RNF219	Q5W0B1	726 aa	Predicted RBP	12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	ISM2	Q6H9L7	571 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	DENND1B	Q6P3S1	775 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	KANSL1	Q7Z3B3	1105 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	CIR1	Q86X95	450 aa	Predicted RBP	12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	SPATS2	Q86XZ4	545 aa	Known RBP	12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	TSC1	Q92574	1164 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	SMARCE1	Q969G3	411 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	SKA1	Q96BD8	255 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	NXPE2	Q96DL1	559 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931	CYTH4	Q9UIA0	394 aa		12.99	□□□□□ -0.33
LETMD1-231	ENST00000551931		E5RJQ4	531 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	CAPN9	O14815	690 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	PSMA7	O14818	248 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	YKT6	O15498	198 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	SMC2	O95347	1197 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	TRUB2	O95900	331 aa	Known RBP	12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	APOE	P02649	317 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	PDGFRA	P16234	1089 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	HNF1B	P35680	557 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	ABCG1	P45844	678 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	ARRB1	P49407	418 aa	Predicted RBP	12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	GCNT1	Q02742	428 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	TARDBP	Q13148	414 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	EIF4EBP2	Q13542	120 aa	Predicted RBP	12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	HES3	Q5TGS1	186 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	SFMBT2	Q5VUG0	894 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	FBXL19	Q6PCT2	694 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	BEND5	Q7L4P6	421 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	CCAR2	Q8N163	923 aa	Known RBP	12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	FRS2	Q8WU20	508 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	FAM131C	Q96AQ9	280 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	BTN2A3P	Q96KV6	586 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	CEP63	Q96MT8	703 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	PRMT1	Q99873	361 aa	Known RBP	12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	SLC4A5	Q9BY07	1137 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	ARHGAP20	Q9P2F6	1191 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	TJP2	Q9UDY2	1190 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	SARDH	Q9UL12	918 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	CNTN6	Q9UQ52	1028 aa		12.98	□□□□□ -0.33
LETMD1-231	ENST00000551931	COL27A1	Q8IZC6	1860 aa	Predicted RBP	12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	ZNF462	Q96JM2	2506 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3D	A0A087WVF3	549 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3I	A0A087WXS9	549 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3E	A0A087X179	549 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3K	A0A087X1G2	549 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3L	B9A6J9	549 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931		F5H5T6	163 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	P4HA2	O15460	535 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	SART1	O43290	800 aa	Known RBP	12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	RTN2	O75298	545 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	C1S	P09871	688 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3H	P0C7X1	549 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	MAT2A	P31153	395 aa	Known RBP	12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	EIF2S3	P41091	472 aa	Known RBP	12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	ACADSB	P45954	432 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	RXRG	P48443	463 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	SEMG2	Q02383	582 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TAF5	Q15542	800 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	C6orf118	Q5T5N4	469 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3G	Q6DHY5	549 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3C	Q6IPX1	549 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	NAPEPLD	Q6IQ20	393 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	KLHL10	Q6JEL2	608 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	CXorf57	Q6NSI4	855 aa	Known RBP	12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TTI2	Q6NXR4	508 aa		12.97	□□□□□ -0.33
LETMD1-231	ENST00000551931	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.97	□□□□□ -0.33

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