RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 KIAA0355O15063 1070 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 DCLK1O15075 740 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 ZSCAN9O15535 394 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 RGS10O43665 173 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 B4GALT3O60512 393 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 TSPAN3O60637 253 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 SRGAP2O75044 1071 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 RPP40O75818 363 aaKnown RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 SGPL1O95470 568 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 POMCP01189 267 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 HSPD1P10809 573 aaKnown RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 ACADMP11310 421 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 PORP16435 677 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 SLC6A2P23975 617 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 TDO2P48775 406 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 CLRN1P58418 232 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 RPP30P78346 268 aaKnown RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 TRDNQ13061 729 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 TDGQ13569 410 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 BOP1Q14137 746 aaKnown RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 IQCB1Q15051 598 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 PLCB4Q15147 1175 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 NECTIN1Q15223 517 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 TAF11Q15544 211 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 TBCEQ15813 527 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 BAK1Q16611 211 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 ZIK1Q3SY52 487 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 MGAT5BQ3V5L5 792 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 CTXN3Q4LDR2 81 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 PRR31Q5SQ13 230 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 FAM69AQ5T7M9 428 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 AGBL4Q5VU57 503 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 ANKS6Q68DC2 871 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 ABLIM2Q6H8Q1 611 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 NAA16Q6N069 864 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 SLC22A25Q6T423 547 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 MED25Q71SY5 747 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 H1FNTQ75WM6 255 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 RUFY3Q7L099 469 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 PPP1R32Q7Z5V6 425 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 CMTM4Q8IZR5 234 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 Q8N1X5 172 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 GALNT4Q8N4A0 578 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 USP38Q8NB14 1042 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 SUPT20HQ8NEM7 779 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 OR14K1Q8NGZ2 314 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 BPIFB1Q8TDL5 484 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 WDR60Q8WVS4 1066 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 HMGB4Q8WW32 186 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 ZNF622Q969S3 477 aaKnown RBP eCLIP3.79□□□□□ -1.8
CUL3-215ENST00000546102 ATP6V1E2Q96A05 226 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 APOPT1Q96IL0 206 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 FAM84BQ96KN1 310 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 SLC46A2Q9BY10 475 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 UPF3BQ9BZI7 483 aaKnown RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 COA1Q9GZY4 146 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 ENKD1Q9H0I2 346 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 NAPBQ9H115 298 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 FAM83DQ9H4H8 585 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 RMI1Q9H9A7 625 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 BARX1Q9HBU1 254 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 PDRG1Q9NUG6 133 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 CHMP5Q9NZZ3 219 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 NDUFAF4Q9P032 175 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 PCDHGB4Q9UN71 923 aa3.79□□□□□ -1.8
CUL3-215ENST00000546102 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.79□□□□□ -1.8
CUL3-215ENST00000546102 GOLGB1Q14789 3259 aaKnown RBP3.78□□□□□ -1.8
CUL3-215ENST00000546102 WDR19Q8NEZ3 1342 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 NAV1Q8NEY1 1877 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 FAM170AA1A519 330 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 CCDC78A2IDD5 438 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 PABPN1LA6NDY0 278 aaKnown RBP3.78□□□□□ -1.8
CUL3-215ENST00000546102 FAM90A20PA6NIJ5 464 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 SNAP23O00161 211 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 ZNF213O14771 459 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 DKC1O60832 514 aaKnown RBP eCLIP3.78□□□□□ -1.8
CUL3-215ENST00000546102 GJB3O75712 270 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 CER1O95813 267 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 BAG3O95817 575 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 MLYCDO95822 493 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 SCGB1D1O95968 90 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 TFRCP02786 760 aaKnown RBP3.78□□□□□ -1.8
CUL3-215ENST00000546102 ZNF888P0CJ79 500 aaPredicted RBP3.78□□□□□ -1.8
CUL3-215ENST00000546102 PCP11498 1178 aaKnown RBP3.78□□□□□ -1.8
CUL3-215ENST00000546102 ZNF28P17035 718 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 TGM1P22735 817 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 PSMC2P35998 433 aaKnown RBP3.78□□□□□ -1.8
CUL3-215ENST00000546102 ARL3P36405 182 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 MLH1P40692 756 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 PAFAH1B1P43034 410 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 NT5C2P49902 561 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 ADCY7P51828 1080 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 LILRA4P59901 499 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 TGFB2P61812 414 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 ADAM8P78325 824 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 SF3A3Q12874 501 aaKnown RBP eCLIP3.78□□□□□ -1.8
CUL3-215ENST00000546102 UBXN2BQ14CS0 331 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 WTAPQ15007 396 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 PSMD6Q15008 389 aa3.78□□□□□ -1.8
CUL3-215ENST00000546102 ZNF484Q5JVG2 852 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms