RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KLHL11Q9NVR0 708 aa15.24■□□□□ 0.03
RTN3-214ENST00000545432 TJP2Q9UDY2 1190 aa15.24■□□□□ 0.03
RTN3-214ENST00000545432 U3KQA8 63 aa15.24■□□□□ 0.03
RTN3-214ENST00000545432 PTPN13Q12923 2485 aa15.24■□□□□ 0.03
RTN3-214ENST00000545432 PRAMEF26H0Y7S4 382 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 ACTN4O43707 911 aaKnown RBP15.23■□□□□ 0.03
RTN3-214ENST00000545432 MPOP05164 745 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 SETSIPP0DME0 302 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
RTN3-214ENST00000545432 PLK1P53350 603 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 TBX4P57082 545 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 GOLGA7BQ2TAP0 167 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 MS4A13Q5J8X5 152 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 MMS22LQ6ZRQ5 1243 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 UBR7Q8N806 425 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 FBXL13Q8NEE6 735 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 KCNE4Q8WWG9 221 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 GRAMD1AQ96CP6 724 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 PAGE5Q96GU1 130 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 FCRL2Q96LA5 508 aaPredicted RBP15.23■□□□□ 0.03
RTN3-214ENST00000545432 IPO9Q96P70 1041 aaKnown RBP15.23■□□□□ 0.03
RTN3-214ENST00000545432 DEPDC7Q96QD5 511 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 DDX50Q9BQ39 737 aaKnown RBP15.23■□□□□ 0.03
RTN3-214ENST00000545432 USP29Q9HBJ7 922 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 EXOC1Q9NV70 894 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 RAB20Q9NX57 234 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 SERTAD1Q9UHV2 236 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 PCDHA7Q9UN72 937 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 COQ4Q9Y3A0 265 aa15.23■□□□□ 0.03
RTN3-214ENST00000545432 A0A1W2PNU3 283 aaPredicted RBP15.22■□□□□ 0.03
RTN3-214ENST00000545432 O00370 1275 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 MYL1P05976 194 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 FYNP06241 537 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 NR2F2P24468 414 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 PSMD8P48556 350 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 GABREP78334 506 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 SRSF1Q07955 248 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■■□□□ 13.4
RTN3-214ENST00000545432 SLC12A1Q13621 1099 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 STAT4Q14765 748 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 SGO2Q562F6 1265 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 DCAF6Q58WW2 860 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.22■□□□□ 0.03
RTN3-214ENST00000545432 FAM186BQ8IYM0 893 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 APCDD1Q8J025 514 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 IFT43Q96FT9 208 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 PRR11Q96HE9 360 aaPredicted RBP15.22■□□□□ 0.03
RTN3-214ENST00000545432 NAF1Q96HR8 494 aaKnown RBP15.22■□□□□ 0.03
RTN3-214ENST00000545432 SPAG5Q96R06 1193 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 FAM13BQ9NYF5 915 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 STIM2Q9P246 746 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 HESX1Q9UBX0 185 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 KIAA1257Q9ULG3 409 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 PPM1HQ9ULR3 514 aa15.22■□□□□ 0.03
RTN3-214ENST00000545432 A0A1B0GVM2 712 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 KLK10O43240 276 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 SDC3O75056 442 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 USP12O75317 370 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 PIAS2O75928 621 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 LUC7L3O95232 432 aaKnown RBP15.21■□□□□ 0.03
RTN3-214ENST00000545432 VDRP11473 427 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 KRT13P13646 458 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 RPL34P49207 117 aaKnown RBP15.21■□□□□ 0.03
RTN3-214ENST00000545432 CSRP3P50461 194 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 METAP1P53582 386 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 KCNMA1Q12791 1236 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 ZCWPW2Q504Y3 356 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 AGBL4Q5VU57 503 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 LCLAT1Q6UWP7 414 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 BEND5Q7L4P6 421 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 SIX6OS1Q8N1H7 587 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 EEF2KMTQ96G04 330 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 KLHDC7BQ96G42 594 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 VCPIP1Q96JH7 1222 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 SLC46A1Q96NT5 459 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 THSD1Q9NS62 852 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 UCKL1Q9NWZ5 548 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 SARDHQ9UL12 918 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 PCDHGA8Q9Y5G5 932 aa15.21■□□□□ 0.03
RTN3-214ENST00000545432 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
RTN3-214ENST00000545432 RTN2O75298 545 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 CSO75390 466 aaKnown RBP15.2■□□□□ 0.02
RTN3-214ENST00000545432 RHOBTB3O94955 611 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 MOCS3O95396 460 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 IL1BP01584 269 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 LTFP02788 710 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 TAS2R38P59533 333 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 DAB2P98082 770 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 EIF4EBP2Q13542 120 aaPredicted RBP15.2■□□□□ 0.02
RTN3-214ENST00000545432 CDH18Q13634 790 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 ISXQ2M1V0 245 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 SETMARQ53H47 684 aaPredicted RBP15.2■□□□□ 0.02
RTN3-214ENST00000545432 PMF1Q6P1K2 205 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 NEK5Q6P3R8 708 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 XKR5Q6UX68 686 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 CEP57L1Q8IYX8 460 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 CARNMT1Q8N4J0 409 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 UBA3Q8TBC4 463 aa15.2■□□□□ 0.02
RTN3-214ENST00000545432 RPL10LQ96L21 214 aaKnown RBP15.2■□□□□ 0.02
RTN3-214ENST00000545432 NUCKS1Q9H1E3 243 aaKnown RBP15.2■□□□□ 0.02
RTN3-214ENST00000545432 PREBQ9HCU5 417 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms