RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 GPR15P49685 360 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 EPHB1P54762 984 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 THOC5Q13769 683 aaKnown RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 RCN1Q15293 331 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 TAF11Q15544 211 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 ACSBG2Q5FVE4 666 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 RPS27LQ71UM5 84 aaKnown RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 TAC4Q86UU9 113 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 IPMKQ8NFU5 416 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 NSL1Q96IY1 281 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 WDCPQ9H6R7 721 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 STAP1Q9ULZ2 295 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 GABRQQ9UN88 632 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 PRG3Q9Y2Y8 225 aaPredicted RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 USP1O94782 785 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 LTFP02788 710 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 BPGMP07738 259 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 NMBRP28336 390 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 MSX2P35548 267 aaPredicted RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 RANBP1P43487 201 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 LGSNQ5TDP6 509 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 TFAP2DQ7Z6R9 452 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 ZNF354CQ86Y25 554 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 MARK4Q96L34 752 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 PPP1R10Q96QC0 940 aaKnown RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 GDAP2Q9NXN4 497 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 GSC2O15499 205 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 CRYBB1P53674 252 aaPredicted RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 CTBP1Q13363 440 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 CCDC6Q16204 474 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 STRADAQ7RTN6 431 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 MAB21L3Q8N8X9 362 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 RBM15BQ8NDT2 890 aaKnown RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 STK32AQ8WU08 396 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 SKA1Q96BD8 255 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 RAB3IPQ96QF0 476 aaPredicted RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 MLPHQ9BV36 600 aaPredicted RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 OSBPL1AQ9BXW6 950 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 XAB2Q9HCS7 855 aaKnown RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 C20orf96Q9NUD7 363 aaPredicted RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 SLC39A10Q9ULF5 831 aa16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 MTF2Q9Y483 593 aaPredicted RBP16.15■□□□□ 0.18
SNRNP70-203ENST00000544278 B4GALT3O60512 393 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 PDE5AO76074 875 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 HMBSP08397 361 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 MAGEA3P43357 314 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 CRLF3Q8IUI8 442 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 APBA2Q99767 749 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 OMDQ99983 421 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 COLEC11Q9BWP8 271 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 FTHL17Q9BXU8 183 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 BRD8Q9H0E9 1235 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 TRMT13Q9NUP7 481 aaKnown RBP16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 MOCS1Q9NZB8 636 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 E9PBE3 544 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 SCAMP3O14828 347 aaKnown RBP16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 BUD23O43709 281 aaKnown RBP16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 KLHL41O60662 606 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 DAB1O75553 588 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 ELNP15502 786 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 ACADSBP45954 432 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 MAXP61244 160 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 RALGPS1Q5JS13 557 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 TTC39CQ8N584 583 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 SNX31Q8N9S9 440 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 OR10T2Q8NGX3 314 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 C5orf42Q9H799 3197 aa16.14■□□□□ 0.17
SNRNP70-203ENST00000544278 SMNDC1O75940 238 aaKnown RBP eCLIP16.13■□□□□ 0.177e-11■■■■■ 31.9
SNRNP70-203ENST00000544278 GSRP00390 522 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 KCNE1P15382 129 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 CCND1P24385 295 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 PGM1P36871 562 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 PBX3P40426 434 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 SNX16P57768 344 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 PDK1Q15118 436 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 SLC30A9Q6PML9 568 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 RAPH1Q70E73 1250 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 ZNF467Q7Z7K2 595 aaPredicted RBP16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 DENND6AQ8IWF6 608 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 CERS2Q96G23 380 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 HCSTQ9UBK5 93 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 VANGL2Q9ULK5 521 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 HBS1LQ9Y450 684 aaKnown RBP16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 XPOTO43592 962 aaKnown RBP16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 STK10O94804 968 aaKnown RBP16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 LINGO3P0C6S8 592 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 HOXD8P13378 290 aaPredicted RBP16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 ABL2P42684 1182 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 SLC18A1P54219 525 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 CAP1Q01518 475 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 OCRLQ01968 901 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 NAPRTQ6XQN6 538 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 RNF135Q8IUD6 432 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 MCUQ8NE86 351 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 PTCD3Q96EY7 689 aaKnown RBP16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 TSC22D3Q99576 134 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 TTC1Q99614 292 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 RTP3Q9BQQ7 232 aa16.13■□□□□ 0.17
SNRNP70-203ENST00000544278 SNX15Q9NRS6 342 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms