RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CD300EQ496F6 205 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 UBAP2Q5T6F2 1119 aaKnown RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 GARNL3Q5VVW2 1013 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 METRNLQ641Q3 311 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 TTI2Q6NXR4 508 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 CDC73Q6P1J9 531 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 FOXR2Q6PJQ5 311 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 MFSD6Q6ZSS7 791 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 RRM2BQ7LG56 351 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 SLFN11Q7Z7L1 901 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 CEP97Q8IW35 865 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 KBTBD2Q8IY47 623 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ELOA2Q8IYF1 753 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ADGRG5Q8IZF4 528 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 OR8H3Q8N146 312 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 NDUFAF2Q8N183 169 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 MB21D1Q8N884 522 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ARL10Q8N8L6 244 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 MSANTD4Q8NCY6 345 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 MDGA1Q8NFP4 955 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ADAMTS17Q8TE56 1095 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 POMGNT1Q8WZA1 660 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 SNX19Q92543 992 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ARHGEF2Q92974 986 aaKnown RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 INTS12Q96CB8 462 aaKnown RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF764Q96H86 408 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 TMEM176AQ96HP8 235 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 NAP1L5Q96NT1 182 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 OSBPL9Q96SU4 736 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ZSWIM1Q9BR11 485 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 GPATCH1Q9BRR8 931 aaKnown RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 DESI2Q9BSY9 194 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 NDST4Q9H3R1 872 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 EPHX3Q9H6B9 360 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ERVMER34-1Q9H9K5 563 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 DBNDD1Q9H9R9 158 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 TAB2Q9NYJ8 693 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 HECAQ9UBI9 543 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 SEL1LQ9UBV2 794 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 OAZ3Q9UMX2 235 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 PCDHB2Q9Y5E7 798 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 CCDC187A0A096LP49 1063 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 A0A1B0GTL3 188 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 C17orf113A0A1B0GUU1 675 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 FAM237BA0A1B0GVD1 139 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 A0A1W2PQM1 296 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 A0A1W2PS29 197 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 FRMD3A2A2Y4 597 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 A8MVJ9 347 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 H0Y626 953 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 PER2O15055 1255 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 LDLRAD4O15165 306 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 TP73O15350 636 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 MFAP3LO75121 409 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 RECQL4O94761 1208 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 TGDSO95455 350 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 GPANK1O95872 356 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 ALDOAP04075 364 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 LYL1P12980 280 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 ATP6V1B1P15313 513 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 SAT1P21673 171 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 TBXAS1P24557 533 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 MCM3P25205 808 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 EEF1DP29692 281 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 HNF1BP35680 557 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 CLK1P49759 484 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 MVDP53602 400 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 CDH8P55286 799 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 PRAMEP78395 509 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 EFNB1P98172 346 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 NHLH2Q02577 135 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 OCA2Q04671 838 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 FPGSQ05932 587 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 TUBB3Q13509 450 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 ELAVL1Q15717 326 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 FAM187BQ17R55 369 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 RAB41Q5JT25 222 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF362Q5T0B9 420 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 FAM102AQ5T9C2 384 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 WDR93Q6P2C0 686 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 DENND5BQ6ZUT9 1274 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 MICALCLQ6ZW33 695 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 CHST9Q7L1S5 443 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 THNSL1Q8IYQ7 743 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 Q8NA96 180 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 TMEM116Q8NCL8 245 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 GPR150Q8NGU9 434 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 GOT1L1Q8NHS2 421 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 GABPB2Q8TAK5 448 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 RSPH1Q8WYR4 309 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 CNOT9Q92600 299 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 SMARCE1Q969G3 411 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 TMEM125Q96AQ2 219 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 FAM136AQ96C01 138 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF653Q96CK0 615 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 TRMT61AQ96FX7 289 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 VPS50Q96JG6 964 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 KLHL15Q96M94 604 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms