RNA–Protein interactions for RNA: ENST00000531129.5

GPATCH4-215, Transcript of G-patch domain containing 4, human

TSL 5

Gene GPATCH4, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH4-215	ENST00000531129	PDGFRA	P16234	1089 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	C5AR1	P21730	350 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	BMP6	P22004	513 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	MAT2A	P31153	395 aa	Known RBP	12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	DRD3	P35462	400 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	NXPH1	P58417	271 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	NUCB2	P80303	420 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SFSWAP	Q12872	951 aa	Known RBP	12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TARDBP	Q13148	414 aa	Known RBP eCLIP	12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	NNT	Q13423	1086 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	INAVA	Q3KP66	663 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	RNF219	Q5W0B1	726 aa	Predicted RBP	12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TBC1D3G	Q6DHY5	549 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TBC1D3C	Q6IPX1	549 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TTI2	Q6NXR4	508 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SPATS2	Q86XZ4	545 aa	Known RBP	12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	PIP4K2C	Q8TBX8	421 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	DHTKD1	Q96HY7	919 aa	Predicted RBP	12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CEP63	Q96MT8	703 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SLC4A5	Q9BY07	1137 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CAAP1	Q9H8G2	361 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	GDF3	Q9NR23	364 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	ARHGAP20	Q9P2F6	1191 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	MAN1B1	Q9UKM7	699 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SARDH	Q9UL12	918 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	IGSF10	Q6WRI0	2623 aa		12	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TP53BP1	Q12888	1972 aa	Predicted RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CABIN1	Q9Y6J0	2220 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	KCNU1	A8MYU2	1149 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	PPP1R3G	B7ZBB8	358 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	PSMA7	O14818	248 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TLX3	O43711	291 aa	Predicted RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	RFPL3	O75679	317 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	LETM1	O95202	739 aa	Predicted RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	IGLV3-25	P01717	112 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	APOE	P02649	317 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	EPHA8	P29322	1005 aa	Predicted RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	ACADVL	P49748	655 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	IRAK1	P51617	712 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	STX17	P56962	302 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	YWHAZ	P63104	245 aa	Known RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SEMG2	Q02383	582 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	GCNT1	Q02742	428 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	KCNH2	Q12809	1159 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	POM121L1P	Q3SYA9	428 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	GJB7	Q6PEY0	223 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CCAR2	Q8N163	923 aa	Known RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	OR52K2	Q8NGK3	314 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	FRS2	Q8WU20	508 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	ZNF606	Q8WXB4	792 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TSC1	Q92574	1164 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SKA1	Q96BD8	255 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	BTN2A3P	Q96KV6	586 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	PRMT1	Q99873	361 aa	Known RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	INTS2	Q9H0H0	1204 aa	Known RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	COX16	Q9P0S2	106 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CNTN6	Q9UQ52	1028 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CA5B	Q9Y2D0	317 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	PCDHGA1	Q9Y5H4	931 aa		11.99	□□□□□ -0.49
GPATCH4-215	ENST00000531129	APC2	O95996	2303 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	COL5A1	P20908	1838 aa	Predicted RBP	11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	GOLGA6L4	A6NEF3	574 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129		F5H5T6	163 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	P4HA2	O15460	535 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SART1	O43290	800 aa	Known RBP	11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	LAT	O43561	262 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	ADH1B	P00325	375 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	PRB1	P04280	392 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	ACADSB	P45954	432 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CENPC	Q03188	943 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CETN1	Q12798	172 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	ACCSL	Q4AC99	568 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	HES3	Q5TGS1	186 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SFMBT2	Q5VUG0	894 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	CXorf57	Q6NSI4	855 aa	Known RBP	11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	BEND5	Q7L4P6	421 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	KANSL1	Q7Z3B3	1105 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TMEM110	Q86TL2	294 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	TRIM59	Q8IWR1	403 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	DEFB106A	Q8N104	65 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	WDTC1	Q8N5D0	677 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	NELFB	Q8WX92	580 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	ALG14	Q96F25	216 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	GTPBP4	Q9BZE4	634 aa	Known RBP	11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	THAP9	Q9H5L6	903 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	POPDC2	Q9HBU9	364 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	RAI2	Q9Y5P3	530 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	AK5	Q9Y6K8	562 aa		11.98	□□□□□ -0.49
GPATCH4-215	ENST00000531129	BPTF	Q12830	3046 aa		11.97	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SMG1	Q96Q15	3661 aa	Known RBP	11.97	□□□□□ -0.49
GPATCH4-215	ENST00000531129	URB1	O60287	2271 aa	Known RBP	11.97	□□□□□ -0.49
GPATCH4-215	ENST00000531129		E9PAM4	449 aa		11.97	□□□□□ -0.49
GPATCH4-215	ENST00000531129	BIN1	O00499	593 aa		11.97	□□□□□ -0.49
GPATCH4-215	ENST00000531129	THAP12	O43422	761 aa		11.97	□□□□□ -0.49
GPATCH4-215	ENST00000531129	SDC3	O75056	442 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms