RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ERVW-1Q9UQF0 538 aa9.36□□□□□ -0.91
CMTM1-210ENST00000528441 HS3ST4Q9Y661 456 aa9.36□□□□□ -0.91
CMTM1-210ENST00000528441 GPR179Q6PRD1 2367 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 EDDM13A0A1B0GTR0 161 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 EPHB6O15197 1021 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SIN3BO75182 1162 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 CLDN11O75508 207 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 RNASEH2AO75792 299 aaKnown RBP9.35□□□□□ -0.91
CMTM1-210ENST00000528441 IL1BP01584 269 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SRPRAP08240 638 aaKnown RBP9.35□□□□□ -0.91
CMTM1-210ENST00000528441 KRT3P12035 628 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 ENGP17813 658 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 TGM1P22735 817 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 FLT3P36888 993 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 CTSOP43234 321 aaPredicted RBP9.35□□□□□ -0.91
CMTM1-210ENST00000528441 RECQLP46063 649 aaPredicted RBP9.35□□□□□ -0.91
CMTM1-210ENST00000528441 STK19P49842 368 aaPredicted RBP9.35□□□□□ -0.91
CMTM1-210ENST00000528441 NOVA1P51513 510 aaKnown RBP9.35□□□□□ -0.91
CMTM1-210ENST00000528441 TPMTP51580 245 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 KRT83P78385 493 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 IRX4P78413 519 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 FMO1Q01740 532 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SLC12A1Q13621 1099 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SLC25A52Q3SY17 297 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 TDRD12Q587J7 1177 aaKnown RBP9.35□□□□□ -0.91
CMTM1-210ENST00000528441 FSCBQ5H9T9 825 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SPDYCQ5MJ68 293 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 PLA2G2CQ5R387 149 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 C6orf118Q5T5N4 469 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SMYD5Q6GMV2 418 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 TFAP2DQ7Z6R9 452 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 MMAAQ8IVH4 418 aaKnown RBP9.35□□□□□ -0.91
CMTM1-210ENST00000528441 APCDD1Q8J025 514 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 RXFP2Q8WXD0 754 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 MYEOVQ96EZ4 313 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 CCDC114Q96M63 670 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 AGPAT1Q99943 283 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 MTG2Q9H4K7 406 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SLC32A1Q9H598 525 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 PRSS16Q9NQE7 514 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 FSCN3Q9NQT6 498 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 DYRK4Q9NR20 520 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 RXFP3Q9NSD7 469 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 PIGVQ9NUD9 493 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 DLL3Q9NYJ7 618 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SLC6A14Q9UN76 642 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SIK3Q9Y2K2 1263 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 SNX10Q9Y5X0 201 aa9.35□□□□□ -0.91
CMTM1-210ENST00000528441 VPS13AQ96RL7 3174 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 A0A1W2PP55 124 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 LNP1A1A4G5 178 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 TTC34A8MYJ7 566 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 C1QTNF3-AMACRE9PGA6 284 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 OPHN1O60890 802 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 GJB6O95452 261 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 SEMA4FO95754 770 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 IGLV3-25P01717 112 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 TPM3P06753 285 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 GPD1P21695 349 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 OR1E1P30953 314 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 CDH5P33151 784 aaPredicted RBP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 SCNN1AP37088 669 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 DNA2P51530 1060 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 COPAP53621 1224 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 CDH4P55283 916 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 JAM2P57087 298 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 CAMK2GQ13555 558 aaPredicted RBP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 TEAD4Q15561 434 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 C15orf59Q2T9L4 293 aaPredicted RBP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 POM121L1PQ3SYA9 428 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 SFMBT2Q5VUG0 894 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 PSAPL1Q6NUJ1 521 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 DSG4Q86SJ6 1040 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 DRC7Q8IY82 874 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 RYBPQ8N488 228 aaPredicted RBP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 PAF1Q8N7H5 531 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 ATP11CQ8NB49 1132 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 OR8D1Q8WZ84 308 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 IGSF8Q969P0 613 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 ERGIC2Q96RQ1 377 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 NPY6RQ99463 290 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 BPIFA3Q9BQP9 254 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 C2orf49Q9BVC5 232 aaPredicted RBP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 TMEM245Q9H330 911 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 ITM2CQ9NQX7 267 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 TMEM74BQ9NUR3 256 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 TMEM51Q9NW97 253 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 FBXL12Q9NXK8 326 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 WSB2Q9NYS7 404 aaPredicted RBP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 MPP6Q9NZW5 540 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 NOCTQ9UK39 431 aaKnown RBP9.34□□□□□ -0.91
CMTM1-210ENST00000528441 PLXND1Q9Y4D7 1925 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 CKAP5Q14008 2032 aa9.34□□□□□ -0.91
CMTM1-210ENST00000528441 ITIH6Q6UXX5 1313 aa9.33□□□□□ -0.92
CMTM1-210ENST00000528441 GVINP1Q7Z2Y8 2422 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms