RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 NR2F6P10588 404 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 EGR2P11161 476 aaPredicted RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 DRD1P21728 446 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ITPKBP27987 946 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 RBL1P28749 1068 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 PCSK6P29122 969 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 MCM5P33992 734 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 MAPK9P45984 424 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 MCM2P49736 904 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 NUCB2P80303 420 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TIAL1Q01085 375 aaKnown RBP eCLIP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TCP10Q12799 353 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TRDNQ13061 729 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 FOXE3Q13461 319 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CUL4BQ13620 913 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ATP1A4Q13733 1029 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TUBA3CQ13748 450 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CYP1B1Q16678 543 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 SHROOM1Q2M3G4 852 aaPredicted RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 P3H1Q32P28 736 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 LSM12Q3MHD2 195 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CRY2Q49AN0 593 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 LCE4AQ5TA78 99 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ARL6IP4Q66PJ3 421 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 SFRP4Q6FHJ7 346 aaPredicted RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CTR9Q6PD62 1173 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TUBA3EQ6PEY2 450 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 USP17L6PQ6QN14 398 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 KLHL17Q6TDP4 642 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 MFSD6Q6ZSS7 791 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 RHOUQ7L0Q8 258 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 MOGAT3Q86VF5 341 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 GATAD2AQ86YP4 633 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ARHGEF19Q8IW93 802 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TEX11Q8IYF3 940 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CERS5Q8N5B7 392 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TDRD7Q8NHU6 1098 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 GPT2Q8TD30 523 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TRAPPC12Q8WVT3 735 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 RUBCNQ92622 972 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 GTF3C6Q969F1 213 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 NSUN4Q96CB9 384 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZNF503Q96F45 646 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 WDYHV1Q96HA8 205 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 PRR11Q96HE9 360 aaPredicted RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZSCAN31Q96LW9 406 aaPredicted RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CDK5RAP1Q96SZ6 601 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 EIF2AK1Q9BQI3 630 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 RIOK1Q9BRS2 568 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 UBAC1Q9BSL1 405 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 FAM167BQ9BTA0 163 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 PAGR1Q9BTK6 254 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 MECRQ9BV79 373 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 SLC26A6Q9BXS9 759 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 PANK2Q9BZ23 570 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CRNKL1Q9BZJ0 848 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 NACAP1Q9BZK3 213 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TM6SF1Q9BZW5 370 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TMX4Q9H1E5 349 aaPredicted RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CPVLQ9H3G5 476 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 SERHL2Q9H4I8 314 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 MMRN2Q9H8L6 949 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TMEM8AQ9HCN3 771 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 KCTD5Q9NXV2 234 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 TMOD4Q9NZQ9 345 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ORC3Q9UBD5 711 aaPredicted RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ST3GAL5Q9UNP4 418 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZSCAN21Q9Y5A6 473 aaPredicted RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 PCDHB7Q9Y5E2 793 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 DDX49Q9Y6V7 483 aaKnown RBP3□□□□□ -1.93
CKS1BP7-201ENST00000522230 SLX4Q8IY92 1834 aa3□□□□□ -1.93
CKS1BP7-201ENST00000522230 CHD4Q14839 1912 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZNF831Q5JPB2 1677 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 CLRN2A0PK11 232 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 SYCE3A1L190 88 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 PIPSLA2A3N6 862 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 TSPY2A6NKD2 308 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 KIF28PB7ZC32 967 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 M0QYT0 321 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 M0QZQ0 153 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 AP4M1O00189 453 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 EIF3FO00303 357 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 MPHOSPH10O00566 681 aaKnown RBP2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 SLC16A3O15427 465 aaKnown RBP2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZBTB43O43298 467 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 CA12O43570 354 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 SPRY2O43597 315 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 ECE2O60344 883 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 SNX2O60749 519 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 PFKFB2O60825 505 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 CBFA2T3O75081 653 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 RPP40O75818 363 aaKnown RBP2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 BBOX1O75936 387 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 PLEKHA8P1O95397 391 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 CER1O95813 267 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 AGR2O95994 175 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 PYGLP06737 847 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 ITGA2BP08514 1039 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 ELFN1P0C7U0 828 aa2.99□□□□□ -1.93
CKS1BP7-201ENST00000522230 GOLGA8HP0CJ92 632 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms