RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 YDJCA8MPS7 323 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 PROB1E7EW31 1015 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 FCHO1O14526 889 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 SPRY2O43597 315 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 ECE2O60344 883 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 TOP3BO95985 862 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 FGBP02675 491 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 PARP1P09874 1014 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 IFIT2P09913 472 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 TMEM191BP0C7N4 346 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 APEHP13798 732 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 HGFP14210 728 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 ATP5F1P24539 256 aaPredicted RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 ADRA1DP25100 572 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 TBX4P57082 545 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 FKBP1AP62942 108 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 TXNL4AP83876 142 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 NUCB1Q02818 461 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 CXCL9Q07325 125 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 KCNB1Q14721 858 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 CLCA4Q14CN2 919 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 TNIP1Q15025 636 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 CCDC158Q5M9N0 1113 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 PLAG1Q6DJT9 500 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 TTLL5Q6EMB2 1281 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 UNC13DQ70J99 1090 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 CENPQQ7L2Z9 268 aaPredicted RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 CHD1LQ86WJ1 897 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 LINC01465Q8N7H1 131 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 NANOGP1Q8N7R0 232 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 PNPLA1Q8N8W4 532 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 UNKQ9C0B0 810 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 OBP2AQ9NY56 170 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 ELOVL5Q9NYP7 299 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 KLHL13Q9P2N7 655 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 ZNF212Q9UDV6 495 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 DBNLQ9UJU6 430 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 CAPN11Q9UMQ6 739 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 COL4A1P02462 1669 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 TNRC6CQ9HCJ0 1690 aaKnown RBP3.7□□□□□ -1.82
VPS13B-209ENST00000521559 FAM205AQ6ZU69 1335 aa3.7□□□□□ -1.82
VPS13B-209ENST00000521559 CACNA1FO60840 1977 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 ANKRD36CQ5JPF3 1778 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 GLTPD2A6NH11 291 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 A6NNZ2 444 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 PSMD14O00487 310 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 SOCS2O14508 198 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 CAND2O75155 1236 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 USP12O75317 370 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 FRAT2O75474 233 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 DDNO94850 711 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 MT-ND5P03915 603 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 KRT18P05783 430 aaKnown RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 ITGB6P18564 788 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 SFPQP23246 707 aaKnown RBP eCLIP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 RBL1P28749 1068 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 MMP14P50281 582 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 MAPK7Q13164 816 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 GRM3Q14832 879 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 TWIST1Q15672 202 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 PFKFB3Q16875 520 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 TTC39AQ5SRH9 613 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 RANBP10Q6VN20 620 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 RNF44Q7L0R7 432 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 SESTD1Q86VW0 696 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 DGKHQ86XP1 1220 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 LIX1LQ8IVB5 337 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 GPC2Q8N158 579 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 FAM71DQ8N9W8 422 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 SPATA5Q8NB90 893 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 MAFAQ8NHW3 353 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 TBC1D22AQ8WUA7 517 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 HIC2Q96JB3 615 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 SNX22Q96L94 193 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 CINPQ9BW66 212 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 WDR26Q9H7D7 661 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 ECHDC1Q9NTX5 307 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 TRNAU1APQ9NX07 287 aaKnown RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 HMG20BQ9P0W2 317 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 DDX20Q9UHI6 824 aaKnown RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 ANKRD31Q8N7Z5 1873 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 PDS5AQ29RF7 1337 aaKnown RBP3.69□□□□□ -1.82
VPS13B-209ENST00000521559 ZNF541Q9H0D2 1346 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 SALL1Q9NSC2 1324 aa3.69□□□□□ -1.82
VPS13B-209ENST00000521559 AFDNP55196 1824 aaKnown RBP3.68□□□□□ -1.82
VPS13B-209ENST00000521559 KIF13BQ9NQT8 1826 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 DDX60Q8IY21 1712 aaKnown RBP3.68□□□□□ -1.82
VPS13B-209ENST00000521559 KIAA1551Q9HCM1 1747 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 MYMKA6NI61 221 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 CLIC1O00299 241 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 THAP12O43422 761 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 ANXA2P07355 339 aaKnown RBP3.68□□□□□ -1.82
VPS13B-209ENST00000521559 TMEM225BP0DP42 221 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 RHCEP18577 417 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 MX1P20591 662 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 RPS12P25398 132 aaKnown RBP3.68□□□□□ -1.82
VPS13B-209ENST00000521559 TACR3P29371 465 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 GNALP38405 381 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 NR4A2P43354 598 aa3.68□□□□□ -1.82
VPS13B-209ENST00000521559 GMPSP49915 693 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms