RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 IRAK1P51617 712 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 CLCNKAP51800 687 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 YWHAZP63104 245 aaKnown RBP6.47□□□□□ -1.37
CHD1-208ENST00000512392 CLCA4Q14CN2 919 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 SLC5A9Q2M3M2 681 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 TRIM60Q495X7 471 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 HS1BP3Q53T59 392 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 GKAP1Q5VSY0 366 aaPredicted RBP6.47□□□□□ -1.37
CHD1-208ENST00000512392 LRSAM1Q6UWE0 723 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 FAM185AQ8N0U4 392 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 ARL14Q8N4G2 192 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.47□□□□□ -1.37
CHD1-208ENST00000512392 PIP4K2CQ8TBX8 421 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 IFI44Q8TCB0 444 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 EPSTI1Q96J88 318 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 TTC25Q96NG3 672 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 DGAT2Q96PD7 388 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 FIZ1Q96SL8 496 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 THUMPD2Q9BTF0 503 aaKnown RBP6.47□□□□□ -1.37
CHD1-208ENST00000512392 LRRCC1Q9C099 1032 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 FSCN3Q9NQT6 498 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 TLR8Q9NR97 1041 aaKnown RBP6.47□□□□□ -1.37
CHD1-208ENST00000512392 BTG4Q9NY30 223 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 ARMCX3Q9UH62 379 aaPredicted RBP6.47□□□□□ -1.37
CHD1-208ENST00000512392 MBD1Q9UIS9 605 aaPredicted RBP6.47□□□□□ -1.37
CHD1-208ENST00000512392 ANAPC2Q9UJX6 822 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 CLEC4AQ9UMR7 237 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 CENPJQ9HC77 1338 aaPredicted RBP6.47□□□□□ -1.37
CHD1-208ENST00000512392 ENO4A6NNW6 628 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 LEFTY1O75610 366 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 MST1P26927 711 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 MSX2P35548 267 aaPredicted RBP6.46□□□□□ -1.37
CHD1-208ENST00000512392 MDH1P40925 334 aaKnown RBP6.46□□□□□ -1.37
CHD1-208ENST00000512392 MRPL12P52815 198 aaKnown RBP6.46□□□□□ -1.37
CHD1-208ENST00000512392 RPS6KA1Q15418 735 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 DPYSL2Q16555 572 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 CCDC142Q17RM4 750 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 INSCQ1MX18 579 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 TWISTNBQ3B726 338 aaPredicted RBP6.46□□□□□ -1.37
CHD1-208ENST00000512392 CRY2Q49AN0 593 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 SPDYAQ5MJ70 313 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 DNTTIP2Q5QJE6 756 aaKnown RBP6.46□□□□□ -1.37
CHD1-208ENST00000512392 ZDHHC24Q6UX98 284 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 KANSL1Q7Z3B3 1105 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 TAF8Q7Z7C8 310 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 LRRC49Q8IUZ0 686 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 P3H2Q8IVL5 708 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 ELMOD2Q8IZ81 293 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 TRIML2Q8N7C3 387 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 DHX58Q96C10 678 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 TUBA1CQ9BQE3 449 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 RIOK1Q9BRS2 568 aaKnown RBP6.46□□□□□ -1.37
CHD1-208ENST00000512392 SLC12A9Q9BXP2 914 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 WDR11Q9BZH6 1224 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 FOXP3Q9BZS1 431 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 TRIM31Q9BZY9 425 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 MBNL1Q9NR56 388 aaKnown RBP6.46□□□□□ -1.37
CHD1-208ENST00000512392 ZSCAN32Q9NX65 697 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 PIM2Q9P1W9 311 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 SLC8A2Q9UPR5 921 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 ADAM18Q9Y3Q7 739 aa6.46□□□□□ -1.37
CHD1-208ENST00000512392 TIMM13Q9Y5L4 95 aaPredicted RBP6.46□□□□□ -1.37
CHD1-208ENST00000512392 ST20-MTHFSA0A0A6YYL1 179 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 RAB27BO00194 218 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 ADAMDEC1O15204 470 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 DAB1O75553 588 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 IDH1O75874 414 aaKnown RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 RASSF9O75901 435 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 GLP2RO95838 553 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 TFRCP02786 760 aaKnown RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 KLKB1P03952 638 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 FGF4P08620 206 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 RHOXF2BP0C7M4 288 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 SFPQP23246 707 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHD1-208ENST00000512392 CD6P30203 668 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 SREBF1P36956 1147 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 PTGER3P43115 390 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 AP3M2P53677 418 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 PRAMEP78395 509 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 ZNF200P98182 395 aaPredicted RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 RNASELQ05823 741 aaKnown RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 NFIXQ14938 502 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 KARSQ15046 597 aaKnown RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 NAA35Q5VZE5 725 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 CWF19L1Q69YN2 538 aaKnown RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 ETFRF1Q6IPR1 90 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 PIK3AP1Q6ZUJ8 805 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 FAM214BQ7L5A3 538 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 NME9Q86XW9 330 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 WDR49Q8IV35 697 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 RASGEF1CQ8N431 466 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 ZNF321PQ8N8H1 164 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 RSC1A1Q92681 617 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 HOXB13Q92826 284 aaPredicted RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 RHOXF2Q9BQY4 288 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 SRSF8Q9BRL6 282 aaKnown RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 CARD6Q9BX69 1037 aa6.46□□□□□ -1.38
CHD1-208ENST00000512392 TTC12Q9H892 705 aaPredicted RBP6.46□□□□□ -1.38
CHD1-208ENST00000512392 POLR1BQ9H9Y6 1135 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms