RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ATXN1P54253 815 aaKnown RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 SLC7A5Q01650 507 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 TWF1Q12792 350 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 IFRD2Q12894 506 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 MTMR3Q13615 1198 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 MORF4L2Q15014 288 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 P3H1Q32P28 736 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 C5orf22Q49AR2 442 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 LRRC31Q6UY01 552 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 GSTA5Q7RTV2 222 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 HDXQ7Z353 690 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 DNAJB7Q7Z6W7 309 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 RELL1Q8IUW5 271 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 KREMEN2Q8NCW0 462 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 CASKIN2Q8WXE0 1202 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 RSAD2Q8WXG1 361 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 ART4Q93070 314 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 TBC1D31Q96DN5 1066 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 CCDC114Q96M63 670 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 PPP1R2P1Q96PQ5 205 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 FMO2Q99518 471 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 VAT1Q99536 393 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 CDCA3Q99618 268 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 GDF15Q99988 308 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 DDX50Q9BQ39 737 aaKnown RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 ACBD3Q9H3P7 528 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 ZDHHC18Q9NUE0 388 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 GPATCH2LQ9NWQ4 482 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 GRHL1Q9NZI5 618 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 DTLQ9NZJ0 730 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 ASIC3Q9UHC3 531 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 STOML2Q9UJZ1 356 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 SHOC2Q9UQ13 582 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 NEU3Q9UQ49 428 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 GREB1Q4ZG55 1949 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 CDC14CA4D256 554 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 C5orf60A6NFR6 353 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 DAPK3O43293 454 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 XYLBO75191 536 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 PAGE1O75459 146 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 SOAT2O75908 522 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 LRIG2O94898 1065 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 KRT14P02533 472 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 C8AP07357 584 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 VSIG8P0DPA2 414 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 PECAM1P16284 738 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-230ENST00000511944 ERCC2P18074 760 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 IVDP26440 423 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 EPHB2P29323 1055 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 ECHS1P30084 290 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 MAGEA6P43360 314 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 SLC11A2P49281 568 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 CARSP49589 748 aaKnown RBP9.36□□□□□ -0.91
NR1I3-230ENST00000511944 HARS2P49590 506 aaKnown RBP9.36□□□□□ -0.91
NR1I3-230ENST00000511944 RABGGTBP53611 331 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 DYNLT1P63172 113 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 CDK16Q00536 496 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 SLMAPQ14BN4 828 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 PRKD1Q15139 912 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-230ENST00000511944 TTC39BQ5VTQ0 682 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-230ENST00000511944 SDHAF4Q5VUM1 108 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 DDX42Q86XP3 938 aaKnown RBP eCLIP9.36□□□□□ -0.91
NR1I3-230ENST00000511944 ALDH16A1Q8IZ83 802 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 GIPC2Q8TF65 315 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 HDAC11Q96DB2 347 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 TSGA13Q96PP4 275 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 TRIM51Q9BSJ1 452 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 PAK5Q9P286 719 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 ZNF510Q9Y2H8 683 aa9.36□□□□□ -0.91
NR1I3-230ENST00000511944 SYNJ2BP-COX16A0A087WUM0 186 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 A0A1W2PNR3 127 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 DRGXA6NNA5 263 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 E9PAM4 449 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 I6L893 689 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 SGK1O00141 431 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 DNALI1O14645 258 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 MAP2K7O14733 419 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 EIF3HO15372 352 aaKnown RBP eCLIP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 COCHO43405 550 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 CREB3O43889 395 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 OPHN1O60890 802 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 GCATO75600 419 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 WFS1O76024 890 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 CA3P07451 260 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 HSPA9P38646 679 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 ADCY8P40145 1251 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 RPL21P46778 160 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 KCNJ1P48048 391 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 MAPKAPK2P49137 400 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 PGFP49763 221 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 NDST2P52849 883 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 ERVFC1P60507 584 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 SLC7A9P82251 487 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 PPIDQ08752 370 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 GALNT2Q10471 571 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 EFEMP1Q12805 493 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 SNX1Q13596 522 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms