RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 GRAP2O75791 330 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 DNAJB5O75953 348 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 DDHD2O94830 711 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 SLITRK3O94933 977 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 GJB6O95452 261 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 RSPH10BP0C881 870 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 SLURP2P0DP57 97 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 COX5BP10606 129 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 CYP2C8P10632 490 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 ENO3P13929 434 aaPredicted RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 CDH2P19022 906 aaPredicted RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PRKAR1BP31321 381 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 HNRNPFP52597 415 aaKnown RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 GPLD1P80108 840 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 TSPY1Q01534 308 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 LRRC63Q05C16 580 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 MGAT3Q09327 533 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 THOC5Q13769 683 aaKnown RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 POU6F1Q14863 301 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PLEKHG4Q58EX7 1191 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 STXBP5Q5T5C0 1151 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PM20D1Q6GTS8 502 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 BORAQ6PGQ7 559 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 DLK2Q6UY11 383 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PPP4R3CPQ6ZMV5 832 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 MARK2Q7KZI7 788 aaKnown RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 TICAM1Q8IUC6 712 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 LRRC71Q8N4P6 559 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 ADCY4Q8NFM4 1077 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 OR6S1Q8NH40 331 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 SHKBP1Q8TBC3 707 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 CHAC2Q8WUX2 184 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 BSNDQ8WZ55 320 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 NCLNQ969V3 563 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 EFHD1Q9BUP0 239 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 TXLNGYQ9BZA5 131 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 UNKQ9C0B0 810 aaKnown RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 TINAGL1Q9GZM7 467 aaPredicted RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 SIK2Q9H0K1 926 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 TMEM60Q9H2L4 133 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 MRPL47Q9HD33 250 aaKnown RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 C8orf4Q9NR00 106 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 DDX28Q9NUL7 540 aaKnown RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 ZDHHC7Q9NXF8 308 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGC3Q9UN70 934 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 HCN4Q9Y3Q4 1203 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGC4Q9Y5F7 938 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGB7Q9Y5F8 929 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGB6Q9Y5F9 930 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGB2Q9Y5G2 931 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGB1Q9Y5G3 927 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGA9Q9Y5G4 932 aaKnown RBP3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGA7Q9Y5G6 932 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGA6Q9Y5G7 932 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGA5Q9Y5G8 931 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHGA1Q9Y5H4 931 aa3.76□□□□□ -1.81
PCDH11X-208ENST00000504220 SCN9AQ15858 1988 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PRR23AA6NEV1 266 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CFAP73A6NFT4 308 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PRRT4C9JH25 899 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 H3BRJ5 948 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PODXLO00592 558 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 LPXNO60711 386 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SOCS5O75159 536 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 DCTN3O75935 186 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SNAPINO95295 136 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 FOSP01100 380 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PTX3P26022 381 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PMLP29590 882 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CTHP32929 405 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 OR1G1P47890 313 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CLCNKBP51801 687 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 KRT17Q04695 432 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 YWHAHQ04917 246 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PPATQ06203 517 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 RUNX1T1Q06455 604 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CACNB2Q08289 660 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TUBA3CQ13748 450 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 OXA1LQ15070 435 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TRIP10Q15642 601 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ANKRD20A4Q4UJ75 823 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 KRBOX4Q5JUW0 171 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PAPD7Q5XG87 772 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 MAP1SQ66K74 1059 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 LIN54Q6MZP7 749 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 FAM122CQ6P4D5 195 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 RFWD3Q6PCD5 774 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SLFN11Q7Z7L1 901 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 GALNT5Q7Z7M9 940 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CDR2LQ86X02 465 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 DGKHQ86XP1 1220 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 AFG1LQ8WV93 481 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CASKIN2Q8WXE0 1202 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CPA5Q8WXQ8 436 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TNFRSF25Q93038 417 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SGF29Q96ES7 293 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ZMAT2Q96NC0 199 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CENPKQ9BS16 269 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 MKNK1Q9BUB5 465 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms