RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ARHGAP33O14559 1287 aa32.31■■■□□ 2.76
LDB1-204ENST00000490751 F9P00740 461 aa32.31■■■□□ 2.76
LDB1-204ENST00000490751 STK19P49842 368 aaPredicted RBP32.31■■■□□ 2.76
LDB1-204ENST00000490751 PLK1P53350 603 aa32.31■■■□□ 2.76
LDB1-204ENST00000490751 C9orf64Q5T6V5 341 aa32.31■■■□□ 2.76
LDB1-204ENST00000490751 SH3PXD2AQ5TCZ1 1133 aa32.31■■■□□ 2.76
LDB1-204ENST00000490751 APTXQ7Z2E3 356 aaKnown RBP32.31■■■□□ 2.76
LDB1-204ENST00000490751 ZCCHC9Q8N567 271 aaKnown RBP32.31■■■□□ 2.76
LDB1-204ENST00000490751 BTBD1Q9H0C5 482 aa32.31■■■□□ 2.76
LDB1-204ENST00000490751 PCED1AQ9H1Q7 454 aa32.31■■■□□ 2.76
LDB1-204ENST00000490751 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP32.3■■■□□ 2.76
LDB1-204ENST00000490751 EDDM13A0A1B0GTR0 161 aa32.3■■■□□ 2.76
LDB1-204ENST00000490751 TARSL2A2RTX5 802 aaKnown RBP32.3■■■□□ 2.76
LDB1-204ENST00000490751 LRRC10BA6NIK2 292 aa32.3■■■□□ 2.76
LDB1-204ENST00000490751 RNASEH1O60930 286 aaKnown RBP32.3■■■□□ 2.76
LDB1-204ENST00000490751 SYPP08247 313 aa32.3■■■□□ 2.76
LDB1-204ENST00000490751 SULT2A1Q06520 285 aa32.3■■■□□ 2.76
LDB1-204ENST00000490751 ZNF177Q13360 481 aaPredicted RBP32.3■■■□□ 2.76
LDB1-204ENST00000490751 C5orf22Q49AR2 442 aa32.3■■■□□ 2.76
LDB1-204ENST00000490751 MINDY1Q8N5J2 469 aa32.3■■■□□ 2.76
LDB1-204ENST00000490751 C6orf106Q9H6K1 298 aaPredicted RBP32.3■■■□□ 2.76
LDB1-204ENST00000490751 METTL5Q9NRN9 209 aaKnown RBP32.3■■■□□ 2.76
LDB1-204ENST00000490751 SNX10Q9Y5X0 201 aa32.3■■■□□ 2.76
LDB1-204ENST00000490751 A0A1B0GTW7 788 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 GIPC1O14908 333 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 CLDN11O75508 207 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 MMP8P22894 467 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 ANO6Q4KMQ2 910 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 OR52K2Q8NGK3 314 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 OR2I1PQ8NGU4 316 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 ALG14Q96F25 216 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 CFAP57Q96MR6 1250 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 ERGIC2Q96RQ1 377 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 PABPC3Q9H361 631 aaKnown RBP32.29■■■□□ 2.76
LDB1-204ENST00000490751 EIF2B4Q9UI10 523 aaKnown RBP32.29■■■□□ 2.76
LDB1-204ENST00000490751 SCML1Q9UN30 329 aa32.29■■■□□ 2.76
LDB1-204ENST00000490751 CACNA1EQ15878 2313 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 SEMA4FO95754 770 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 ATP1A3P13637 1013 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 CSRP1P21291 193 aaKnown RBP32.28■■■□□ 2.76
LDB1-204ENST00000490751 NNMTP40261 264 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 CDH4P55283 916 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 CST6Q15828 149 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 TRIM72Q6ZMU5 477 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 SLC30A5Q8TAD4 765 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 SNX19Q92543 992 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 PPP1R9BQ96SB3 815 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 C11orf70Q9BRQ4 267 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 NAT10Q9H0A0 1025 aaKnown RBP32.28■■■□□ 2.76
LDB1-204ENST00000490751 TMPRSS4Q9NRS4 437 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 TMEM51Q9NW97 253 aa32.28■■■□□ 2.76
LDB1-204ENST00000490751 CNTN5O94779 1100 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 ARCQ7LC44 396 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 BNIPLQ7Z465 357 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 MMAAQ8IVH4 418 aaKnown RBP32.27■■■□□ 2.76
LDB1-204ENST00000490751 HDDC3Q8N4P3 179 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 EMC1Q8N766 993 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 GANCQ8TET4 914 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 PTPRN2Q92932 1015 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 FEM1AQ9BSK4 669 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 SGK2Q9HBY8 427 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 NCKAP1Q9Y2A7 1128 aa32.27■■■□□ 2.76
LDB1-204ENST00000490751 MID1O15344 667 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 OPHN1O60890 802 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 RDXP35241 583 aaKnown RBP32.26■■■□□ 2.75
LDB1-204ENST00000490751 ALFQ53S48 1182 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 USP30Q70CQ3 517 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 PHLDB2Q86SQ0 1253 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 ZNF683Q8IZ20 524 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 STK40Q8N2I9 435 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 DEFB124Q8NES8 71 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 PCDHB18PQ96TA0 734 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 FBXL12Q9NXK8 326 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 SLC25A13Q9UJS0 675 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 VPS28Q9UK41 221 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 TBC1D30Q9Y2I9 924 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 ZBTB32Q9Y2Y4 487 aaPredicted RBP32.26■■■□□ 2.75
LDB1-204ENST00000490751 OR51B4Q9Y5P0 310 aa32.26■■■□□ 2.75
LDB1-204ENST00000490751 BCAT2O15382 392 aaPredicted RBP32.25■■■□□ 2.75
LDB1-204ENST00000490751 UNGP13051 313 aaPredicted RBP32.25■■■□□ 2.75
LDB1-204ENST00000490751 GRIK2Q13002 908 aa32.25■■■□□ 2.75
LDB1-204ENST00000490751 LRRC31Q6UY01 552 aa32.25■■■□□ 2.75
LDB1-204ENST00000490751 FAM131BQ86XD5 332 aa32.25■■■□□ 2.75
LDB1-204ENST00000490751 FAM129BQ96TA1 746 aa32.25■■■□□ 2.75
LDB1-204ENST00000490751 SERGEFQ9UGK8 458 aa32.25■■■□□ 2.75
LDB1-204ENST00000490751 CEACAM1P13688 526 aa32.24■■■□□ 2.75
LDB1-204ENST00000490751 VAV1P15498 845 aa32.24■■■□□ 2.75
LDB1-204ENST00000490751 PSMD8P48556 350 aa32.24■■■□□ 2.75
LDB1-204ENST00000490751 ATP11AP98196 1134 aa32.24■■■□□ 2.75
LDB1-204ENST00000490751 SFSWAPQ12872 951 aaKnown RBP32.24■■■□□ 2.75
LDB1-204ENST00000490751 SEMA3BQ13214 749 aa32.24■■■□□ 2.75
LDB1-204ENST00000490751 CAVIN1Q6NZI2 390 aaKnown RBP32.24■■■□□ 2.75
LDB1-204ENST00000490751 C1orf216Q8TAB5 229 aa32.24■■■□□ 2.75
LDB1-204ENST00000490751 C1orf74Q96LT6 269 aa32.24■■■□□ 2.75
LDB1-204ENST00000490751 MUC3BQ9H195 1237 aa32.24■■■□□ 2.75
LDB1-204ENST00000490751 A0A1W2PP55 124 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 RHOCP08134 193 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 PMLP29590 882 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 SLC8A1P32418 973 aa32.23■■■□□ 2.75
LDB1-204ENST00000490751 NSFP46459 744 aaKnown RBP32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms