RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 CDR2Q01850 454 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 DEUP1Q05D60 604 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 SLC25A52Q3SY17 297 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 C5orf22Q49AR2 442 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 BRMS1LQ5PSV4 323 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 C9orf64Q5T6V5 341 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 ZNF776Q68DI1 518 aaPredicted RBP18.34■□□□□ 0.53
HLA-A-206ENST00000479320 CXorf57Q6NSI4 855 aaKnown RBP18.34■□□□□ 0.53
HLA-A-206ENST00000479320 APTXQ7Z2E3 356 aaKnown RBP18.34■□□□□ 0.53
HLA-A-206ENST00000479320 DHX40Q8IX18 779 aaKnown RBP18.34■□□□□ 0.53
HLA-A-206ENST00000479320 MSANTD4Q8NCY6 345 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 PCMTD1Q96MG8 357 aaPredicted RBP18.34■□□□□ 0.53
HLA-A-206ENST00000479320 SPAG5Q96R06 1193 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 GTPBP2Q9BX10 602 aaKnown RBP18.34■□□□□ 0.53
HLA-A-206ENST00000479320 TKTL2Q9H0I9 626 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 SUSD2Q9UGT4 822 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 TMEM59LQ9UK28 342 aa18.34■□□□□ 0.53
HLA-A-206ENST00000479320 ITIH6Q6UXX5 1313 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 TARSL2A2RTX5 802 aaKnown RBP18.33■□□□□ 0.53
HLA-A-206ENST00000479320 ARHGAP33O14559 1287 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 STAT1P42224 750 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 ATXN3P54252 364 aaPredicted RBP18.33■□□□□ 0.53
HLA-A-206ENST00000479320 FMO1Q01740 532 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 UBXN1Q04323 297 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 TYRO3Q06418 890 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 RNF219Q5W0B1 726 aaPredicted RBP18.33■□□□□ 0.53
HLA-A-206ENST00000479320 TRNP1Q6NT89 227 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 PSAPL1Q6NUJ1 521 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 SND1Q7KZF4 910 aaKnown RBP eCLIP18.33■□□□□ 0.533e-14■■■■□ 20
HLA-A-206ENST00000479320 NEK11Q8NG66 645 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 OR52K2Q8NGK3 314 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 ALG14Q96F25 216 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 PCED1AQ9H1Q7 454 aa18.33■□□□□ 0.53
HLA-A-206ENST00000479320 C6orf106Q9H6K1 298 aaPredicted RBP18.33■□□□□ 0.53
HLA-A-206ENST00000479320 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.32■□□□□ 0.52
HLA-A-206ENST00000479320 DYNC1I1O14576 645 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 GIPC1O14908 333 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 SYPP08247 313 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 CSRP1P21291 193 aaKnown RBP18.32■□□□□ 0.52
HLA-A-206ENST00000479320 STK19P49842 368 aaPredicted RBP18.32■□□□□ 0.52
HLA-A-206ENST00000479320 NOVA1P51513 510 aaKnown RBP18.32■□□□□ 0.52
HLA-A-206ENST00000479320 OXCT1P55809 520 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 ZNF177Q13360 481 aaPredicted RBP18.32■□□□□ 0.52
HLA-A-206ENST00000479320 SH3PXD2AQ5TCZ1 1133 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 ARCQ7LC44 396 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 AOPEPQ8N6M6 819 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 OR2I1PQ8NGU4 316 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 PTPRN2Q92932 1015 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 ERGIC2Q96RQ1 377 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 FAM129BQ96TA1 746 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 BTBD1Q9H0C5 482 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 MIR1-1HGQ9H1L0 117 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 TMPRSS4Q9NRS4 437 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 TMEM51Q9NW97 253 aa18.32■□□□□ 0.52
HLA-A-206ENST00000479320 NYNRINQ9P2P1 1898 aaKnown RBP18.32■□□□□ 0.52
HLA-A-206ENST00000479320 EIF2B4Q9UI10 523 aaKnown RBP18.32■□□□□ 0.52
HLA-A-206ENST00000479320 EDDM13A0A1B0GTR0 161 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 A0A1B0GTW7 788 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 RNASEH1O60930 286 aaKnown RBP18.31■□□□□ 0.52
HLA-A-206ENST00000479320 CLDN11O75508 207 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 CNTN5O94779 1100 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 ATP1A3P13637 1013 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 MMP8P22894 467 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 NNMTP40261 264 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 CDH4P55283 916 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 SULT2A1Q06520 285 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 TTC31Q49AM3 519 aaPredicted RBP18.31■□□□□ 0.52
HLA-A-206ENST00000479320 BNIPLQ7Z465 357 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 ZNF683Q8IZ20 524 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 ZCCHC9Q8N567 271 aaKnown RBP18.31■□□□□ 0.52
HLA-A-206ENST00000479320 MINDY1Q8N5J2 469 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 SLC30A5Q8TAD4 765 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 CFAP57Q96MR6 1250 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 PCDHB18PQ96TA0 734 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 FEM1AQ9BSK4 669 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 PABPC3Q9H361 631 aaKnown RBP18.31■□□□□ 0.52
HLA-A-206ENST00000479320 SCML1Q9UN30 329 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 NCKAP1Q9Y2A7 1128 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 TBC1D30Q9Y2I9 924 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 PAXBP1Q9Y5B6 917 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 OR51B4Q9Y5P0 310 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 SNX10Q9Y5X0 201 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 PCNX2A6NKB5 2137 aa18.31■□□□□ 0.52
HLA-A-206ENST00000479320 DRGXA6NNA5 263 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 SEMA4FO95754 770 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 UNGP13051 313 aaPredicted RBP18.3■□□□□ 0.52
HLA-A-206ENST00000479320 CEACAM1P13688 526 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 SEMA3BQ13214 749 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 CST6Q15828 149 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 ANO6Q4KMQ2 910 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 TRIM72Q6ZMU5 477 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 USP30Q70CQ3 517 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 PHLDB2Q86SQ0 1253 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 MMAAQ8IVH4 418 aaKnown RBP18.3■□□□□ 0.52
HLA-A-206ENST00000479320 STK40Q8N2I9 435 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 EMC1Q8N766 993 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 C1orf216Q8TAB5 229 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 PDLIM2Q96JY6 352 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 C1orf74Q96LT6 269 aa18.3■□□□□ 0.52
HLA-A-206ENST00000479320 SGK2Q9HBY8 427 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms