RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 F9P00740 461 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 THRAP10827 490 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ALOX12P18054 663 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 PFKPQ01813 784 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 PTPAQ15257 358 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ZNF697Q5TEC3 545 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 FBXO39Q8N4B4 442 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ZNF354BQ96LW1 612 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 RIBC2Q9H4K1 309 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 A1CFQ9NQ94 594 aaKnown RBP13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 FKBP14Q9NWM8 211 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 CRATP43155 626 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 NAMPTP43490 491 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 CYP4F2P78329 520 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 CYP4F3Q08477 520 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TSNQ15631 228 aaKnown RBP13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ALX1Q15699 326 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TBCELQ5QJ74 424 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 RAET1GQ6H3X3 334 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ABCG8Q9H221 673 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 HSPA13P48723 471 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ZNF484Q5JVG2 852 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 BNC2Q6ZN30 1099 aaPredicted RBP13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 MTG1Q9BT17 334 aaPredicted RBP13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 PHF20Q9BVI0 1012 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TMEM138Q9NPI0 162 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 SLC35C2Q9NQQ7 365 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 PRG2P13727 222 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ZNF37AP17032 561 aaPredicted RBP13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 RASA1P20936 1047 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 CLK3P49761 638 aaKnown RBP13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 CHD4Q14839 1912 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 OASLQ15646 514 aaKnown RBP13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ZCWPW2Q504Y3 356 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 MFSD7Q6UXD7 560 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 PIGKQ92643 395 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 RERGQ96A58 199 aaPredicted RBP13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 OMA1Q96E52 524 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TMEM5Q9Y2B1 443 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ACOT9Q9Y305 439 aa13.47□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 KPNA6O60684 536 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 VDRP11473 427 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 IL1R1P14778 569 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 SERPINA13PQ6UXR4 307 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 DSELQ8IZU8 1212 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 THRSPQ92748 146 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 CXorf40BQ96DE9 158 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 BPNT1O95861 308 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 IGSF6O95976 241 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 POLR2LP62875 67 aaKnown RBP13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 GRIK4Q16099 956 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 GTF2IRD2BQ6EKJ0 949 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 GTF2IRD2Q86UP8 949 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 EFCAB3Q8N7B9 438 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 CXorf40AQ8TE69 158 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 RNF145Q96MT1 663 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TINF2Q9BSI4 451 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TTC3P53804 2025 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 SCN2BO60939 215 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 UQCRBP14927 111 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 WARSP23381 471 aaKnown RBP13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 NPTX2P47972 431 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 DLG1Q12959 904 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TMEM120AQ9BXJ8 343 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 GULP1Q9UBP9 304 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRG6 482 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 GAS2O43903 313 aaKnown RBP13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 USP12O75317 370 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 TSPAN19P0C672 248 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 INSRRP14616 1297 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 VEGFAP15692 232 aaPredicted RBP13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 C21orf59P57076 290 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 RAPSNQ13702 412 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 IL27RAQ6UWB1 636 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 ZC3H7AQ8IWR0 971 aaKnown RBP13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 RIT2Q99578 217 aa13.46□□□□□ -0.25
NPHP3-ACAD11-201ENST00000471702 MYL12BO14950 172 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SPATA31D3P0C874 917 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 ITPKBP27987 946 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 PDPK2PQ6A1A2 396 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 TMED8Q6PL24 325 aaPredicted RBP13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 C4orf22Q6V702 233 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CYP2R1Q6VVX0 501 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 SPATA31D4Q6ZUB0 917 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 KANSL3Q9P2N6 904 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DRG1Q9Y295 367 aaKnown RBP13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DNAJC13O75165 2243 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 BUD23O43709 281 aaKnown RBP13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 CYP11B1P15538 503 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 NDST1P52848 882 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 DMPKQ09013 629 aa13.46□□□□□ -0.26
NPHP3-ACAD11-201ENST00000471702 FAPQ12884 760 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms