RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PGAM1P18669 254 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF157P51786 506 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF354CQ86Y25 554 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 MYLPFQ96A32 169 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 APBA2Q99767 749 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 SAR1AQ9NR31 198 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 SNX15Q9NRS6 342 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 TMLHEQ9NVH6 421 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 SBF1O95248 1867 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 E9PBE3 544 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 KLHL41O60662 606 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 PDE5AO76074 875 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 THPOP40225 353 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 BZW1Q7L1Q6 419 aaKnown RBP18.25■□□□□ 0.51
MCF2L-221ENST00000469415 WDR6Q9NNW5 1121 aaKnown RBP18.25■□□□□ 0.51
MCF2L-221ENST00000469415 TTC24A2A3L6 582 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-221ENST00000469415 PLIN3O60664 434 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 PMPCBO75439 489 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 USP1O94782 785 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 NMBRP28336 390 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 CPT1AP50416 773 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 PCSK7Q16549 785 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 TEX44Q53QW1 395 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 NOMO2Q5JPE7 1267 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 WWP1Q9H0M0 922 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 CD68P34810 354 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 ATXN3P54252 364 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 RALGPS1Q5JS13 557 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 GDF6Q6KF10 455 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 FSTL4Q6MZW2 842 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 WDR75Q8IWA0 830 aaKnown RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 GTF3C2Q8WUA4 911 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 NAF1Q96HR8 494 aaKnown RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 MPP6Q9NZW5 540 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 WARSP23381 471 aaKnown RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 MAGEA6P43360 314 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 SERPINB9P50453 376 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 TRIM32Q13049 653 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 CTBP1Q13363 440 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 TEDDM1Q5T9Z0 273 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 TAC4Q86UU9 113 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 PPP4R1Q8TF05 950 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 MTBPQ96DY7 904 aa18.24■□□□□ 0.51
MCF2L-221ENST00000469415 PPP1R10Q96QC0 940 aaKnown RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 MLPHQ9BV36 600 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-221ENST00000469415 DCLK1O15075 740 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 FGF3P11487 239 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-221ENST00000469415 HOXD8P13378 290 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-221ENST00000469415 ADAM17P78536 824 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 DPYSQ14117 519 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 PCLAFQ15004 111 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 TOP6BLQ8N6T0 577 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF398Q8TD17 642 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 SCYL1Q96KG9 808 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 NDFIP2Q9NV92 336 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 A0A096LPK6 155 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 SPECC1L-ADORA2AF8WAN1 911 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 TBX10O75333 385 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 GSRP00390 522 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 RALBP11234 206 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 PURAQ00577 322 aaKnown RBP18.23■□□□□ 0.51
MCF2L-221ENST00000469415 SEPT6Q14141 434 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 CFAP157Q5JU67 520 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF280DQ6N043 979 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 AGMOQ6ZNB7 445 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 PSTKQ8IV42 348 aaKnown RBP18.23■□□□□ 0.51
MCF2L-221ENST00000469415 THAP1Q9NVV9 213 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 KCNK4Q9NYG8 393 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 PLXNA1Q9UIW2 1896 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 NEBLO76041 1014 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 CCNFP41002 786 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 NIPAL4Q0D2K0 466 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 SNX30Q5VWJ9 437 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 MBLAC2Q68D91 279 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 LRRTM3Q86VH5 581 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 RNF135Q8IUD6 432 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.23■□□□□ 0.51
MCF2L-221ENST00000469415 PIWIL2Q8TC59 973 aaKnown RBP18.23■□□□□ 0.51
MCF2L-221ENST00000469415 OMDQ99983 421 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 GORASP1Q9BQQ3 440 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 PPP1R12CQ9BZL4 782 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 ARHGAP39Q9C0H5 1083 aa18.23■□□□□ 0.51
MCF2L-221ENST00000469415 TK2O00142 265 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 CCL22O00626 93 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 TGDSO95455 350 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 PAX7P23759 505 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 MSX2P35548 267 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-221ENST00000469415 C1orf146Q5VVC0 180 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 TRIM42Q8IWZ5 723 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 MARK4Q96L34 752 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 C7orf26Q96N11 449 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 APOBEC2Q9Y235 224 aaKnown RBP18.22■□□□□ 0.51
MCF2L-221ENST00000469415 BPTFQ12830 3046 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 SHROOM3Q8TF72 1996 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 DCXO43602 365 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 HSPA4LO95757 839 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 CHRNA1P02708 482 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 CPA3P15088 417 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 AXLP30530 894 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 GP5P40197 560 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms