RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 UBA2Q9UBT2 640 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FAM8A1Q9UBU6 413 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ANAPC5Q9UJX4 755 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PCDHA4Q9UN74 947 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 MRPL11Q9Y3B7 192 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 UGT2A1Q9Y4X1 527 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 AP4B1Q9Y6B7 739 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ZHX2Q9Y6X8 837 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 RREB1Q92766 1687 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 NWD2Q9ULI1 1742 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 A0A1B0GUL6 1792 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ARPC4-TTLL3A0A0A6YYG9 625 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 A0A0G2JND7 137 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CLRN2A0PK11 232 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ARHGAP42A6NI28 874 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SAC3D1A6NKF1 404 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 H3BNH8 94 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PSMD12O00232 456 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 POLR1CO15160 346 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SLC16A3O15427 465 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 TLR2O60603 784 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A9O60656 530 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 KRT37O76014 449 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CLPXO76031 633 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 NOL4O94818 638 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ACSL3O95573 720 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CRTAMO95727 393 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 BCL10O95999 233 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 B3GALT4O96024 378 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 FUCA1P04066 466 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 RPS17P08708 135 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UQCRFS1P1P0C7P4 283 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 RBP3P10745 1247 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 EEF2P13639 858 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 GFAPP14136 432 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A6P19224 532 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ITIH1P19827 911 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CCNA2P20248 432 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 IMPDH1P20839 514 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A1P22309 533 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A4P22310 534 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PROZP22891 400 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 TBXAS1P24557 533 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 RPA1P27694 616 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A3P35503 534 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A5P35504 534 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 RXRGP48443 463 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CEBPAP49715 358 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 DNA2P51530 1060 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 KPNA1P52294 538 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 HK2P52789 917 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 COPAP53621 1224 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 AP3M2P53677 418 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 AP2S1P53680 142 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SLC5A3P53794 718 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ALDH18A1P54886 795 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 NLRP11P59045 1033 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 B2MP61769 119 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF200P98182 395 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 FAAP100Q0VG06 881 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 BNIP3Q12983 259 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 IDI1Q13907 227 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PDE1CQ14123 709 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 MPP2Q14168 576 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 NFE2L1Q14494 772 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SQLEQ14534 574 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 HERC3Q15034 1050 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PRKD1Q15139 912 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF174Q15697 407 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 DDR2Q16832 855 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CWF19L2Q2TBE0 894 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 INO80DQ53TQ3 878 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 HABP4Q5JVS0 413 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SLC10A5Q5PT55 438 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 RABGAP1LQ5R372 815 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ZBTB41Q5SVQ8 909 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 STXBP5Q5T5C0 1151 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 C6orf183Q5T699 404 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 KIF6Q6ZMV9 814 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SPOCD1Q6ZMY3 1216 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 LRRC55Q6ZSA7 311 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 GSTA5Q7RTV2 222 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC25Q86WR0 208 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 HORMAD1Q86X24 394 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SLC13A5Q86YT5 568 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 TICAM1Q8IUC6 712 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CRLF3Q8IUI8 442 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 KIAA2013Q8IYS2 634 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PRELID2Q8N945 189 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 IL17REQ8NFR9 667 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 LILRB1Q8NHL6 650 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 RFWD2Q8NHY2 731 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 GSDMBQ8TAX9 411 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 TBC1D15Q8TC07 691 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 FNIP1Q8TF40 1166 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 TRIB2Q92519 343 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC74AQ96AQ1 378 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 E2F7Q96AV8 911 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 VMP1Q96GC9 406 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF486Q96H40 463 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms