RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 YWHAHQ04917 246 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 PDCD2Q16342 344 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 KIAA0319Q5VV43 1072 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 TAC4Q86UU9 113 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 TEX9Q8N6V9 391 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ZNF778Q96MU6 729 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 MAF1Q9H063 256 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 LRRC40Q9H9A6 602 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 NT5MQ9NPB1 228 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 TMEM216Q9P0N5 145 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 NKX1-2Q9UD57 310 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 GABRQQ9UN88 632 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 RBBP6Q7Z6E9 1792 aaKnown RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 PRR5-ARHGAP8B1AHC4 643 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 BNIP3LO60238 219 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 TBX18O95935 607 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 CPA3P15088 417 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 CCND1P24385 295 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 MSX2P35548 267 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 CHRNA4P43681 627 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ARHGAP8P85298 464 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ASPHQ12797 758 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 PARP6Q2NL67 630 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ITPRIPL1Q6GPH6 555 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 GLB1LQ6UWU2 654 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 KCNMB4Q86W47 210 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 IFNLR1Q8IU57 520 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ATAD1Q8NBU5 361 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ELMO2Q96JJ3 720 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 KATNBL1Q9H079 304 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 MYO7AQ13402 2215 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 TSPAN3O60637 253 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 DAB1O75553 588 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 GCATO75600 419 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 KRT36O76013 467 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ZNF865P0CJ78 1059 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 KCNA10Q16322 511 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 LDB1Q86U70 411 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 LINC01465Q8N7H1 131 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 SLC26A7Q8TE54 656 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ZIC5Q96T25 663 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 FRMD8Q9BZ67 464 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 DERAQ9Y315 318 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 E7ESA3 106 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 TRDMT1O14717 391 aaKnown RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 DCXO43602 365 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 PGAM1P18669 254 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 TSPAN8P19075 237 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 PTPN3P26045 913 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 IRF9Q00978 393 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 TSNAXIP1Q2TAA8 658 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 PTAR1Q7Z6K3 402 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 PSTKQ8IV42 348 aaKnown RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 TOP6BLQ8N6T0 577 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 NDNQ99608 321 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 DENND2DQ9H6A0 471 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 TMEM30AQ9NV96 361 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 PCDH10Q9P2E7 1040 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 RUVBL2Q9Y230 463 aaKnown RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 TTC3P53804 2025 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 KIF13BQ9NQT8 1826 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 RFPL1O75677 317 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 GP5P40197 560 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 ZBTB6Q15916 424 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 C10orf120Q5SQS8 335 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 SWT1Q5T5J6 900 aaKnown RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 RINLQ6ZS11 566 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 CIR1Q86X95 450 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 NPWQ8N729 165 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 STK32AQ8WU08 396 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 SP110Q9HB58 689 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 DMAP1Q9NPF5 467 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 PRKAG3Q9UGI9 489 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 ZMYND8Q9ULU4 1186 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 GNEQ9Y223 722 aaKnown RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 DPYSL4O14531 572 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 NMBRP28336 390 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 GPR15P49685 360 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 ZBTB17Q13105 803 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 PDE1CQ14123 709 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 CNGA3Q16281 694 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 PKDCCQ504Y2 493 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 RGS9BPQ6ZS82 235 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 DQX1Q8TE96 717 aaKnown RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 GIPC2Q8TF65 315 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 FCRL2Q96LA5 508 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 SNX15Q9NRS6 342 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 SPATS2LQ9NUQ6 558 aaKnown RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 EURLQ9NYK6 297 aa12.23□□□□□ -0.45
SMPD4-213ENST00000454468 TRIP12Q14669 1992 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-213ENST00000454468 GLRA3O75311 464 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 OAS1P00973 400 aaKnown RBP12.22□□□□□ -0.45
SMPD4-213ENST00000454468 AMHP03971 560 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 ARMC3Q5W041 872 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 AGMOQ6ZNB7 445 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 PAQR9Q6ZVX9 377 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 BTBD10Q9BSF8 475 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 ANLNQ9NQW6 1124 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms