RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CD6P30203 668 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 RDXP35241 583 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 ADRA1BP35368 520 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 PRKCIP41743 596 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 NSFP46459 744 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 CDH4P55283 916 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 IRX4P78413 519 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 FANCCQ00597 558 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 RPL6Q02878 288 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 ZNF33AQ06730 810 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 C15orf59Q2T9L4 293 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 SKOR2Q2VWA4 1001 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 FILIP1LQ4L180 1135 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 FIGNQ5HY92 759 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 ACBD5Q5T8D3 534 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 ACAD10Q6JQN1 1059 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 SND1Q7KZF4 910 aaKnown RBP eCLIP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 CYP2U1Q7Z449 544 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 MCOLN2Q8IZK6 566 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 C3orf20Q8ND61 904 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 FRS2Q8WU20 508 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 PIGKQ92643 395 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 PRCCQ92733 491 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 PTPRN2Q92932 1015 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 TOE1Q96GM8 510 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 MAGEB5Q9BZ81 275 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 RSPH9Q9H1X1 276 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 FBRSQ9HAH7 460 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 TAS2R14Q9NYV8 317 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 EVLQ9UI08 416 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 PAXBP1Q9Y5B6 917 aa14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 MUC22E2RYF6 1773 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-204ENST00000449062 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 TARSL2A2RTX5 802 aaKnown RBP14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 CDX4O14627 284 aaPredicted RBP14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 SIN3BO75182 1162 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 MOCS3O95396 460 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 CALB1P05937 261 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 CCDC172P0C7W6 258 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 OXTRP30559 389 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 HOXD12P35452 270 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 OXCT1P55809 520 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 HDAC4P56524 1084 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 ATP11AP98196 1134 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 NRG1Q02297 640 aaPredicted RBP14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 ZBTB16Q05516 673 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 ZNF177Q13360 481 aaPredicted RBP14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 MANEALQ5VSG8 457 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 LYSMD4Q5XG99 296 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 ARMCX6Q7L4S7 300 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 STRADAQ7RTN6 431 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 ERMP1Q7Z2K6 904 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 ZNF571Q7Z3V5 609 aaPredicted RBP14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 FAM131BQ86XD5 332 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 CCDC117Q8IWD4 279 aaPredicted RBP14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 CADM4Q8NFZ8 388 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 C1orf216Q8TAB5 229 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 DNASE2BQ8WZ79 361 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 VCPIP1Q96JH7 1222 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 RPL10LQ96L21 214 aaKnown RBP14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 RTKNQ9BST9 563 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 OSBPL2Q9H1P3 480 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 MPP6Q9NZW5 540 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 CHD8Q9HCK8 2581 aa14.48□□□□□ -0.09
RTFDC1-204ENST00000449062 ASCC3Q8N3C0 2202 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 LNP1A1A4G5 178 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 DCDC2BA2VCK2 349 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 KHNYNO15037 678 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 ATP9BO43861 1147 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 SDC4P31431 198 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 STK19P49842 368 aaPredicted RBP14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 ST8SIA6P61647 398 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 RPL7AP62424 266 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 SULT2A1Q06520 285 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 STPG1Q5TH74 334 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 SLC23A3Q6PIS1 610 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 PSMB7Q99436 277 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 NUP58Q9BVL2 599 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 HAUS4Q9H6D7 363 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 CAPN10Q9HC96 672 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 CABIN1Q9Y6J0 2220 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 ACACBO00763 2458 aa14.47□□□□□ -0.09
RTFDC1-204ENST00000449062 METTL12A8MUP2 240 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 E9PAM4 449 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 FAM72CH0Y354 149 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 DDX3XO00571 662 aaKnown RBP eCLIP14.46□□□□□ -0.092e-12■■■■□ 19.9
RTFDC1-204ENST00000449062 MT-CO1P00395 513 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 SERPINC1P01008 464 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 GZMAP12544 262 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 TNFAIP3P21580 790 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 RRM1P23921 792 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 ACSL1P33121 698 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 DPP6P42658 865 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 ZNF143P52747 638 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 AASDHQ4L235 1098 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 FAM72AQ5TYM5 149 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 SFMBT2Q5VUG0 894 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 RNF219Q5W0B1 726 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 HGSNATQ68CP4 663 aa14.46□□□□□ -0.09
RTFDC1-204ENST00000449062 PLEKHA7Q6IQ23 1121 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms