RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 C3orf20Q8ND61 904 aa18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 CENPIQ92674 756 aaPredicted RBP18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 ZNF419Q96HQ0 510 aaPredicted RBP18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 C1orf74Q96LT6 269 aa18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 HSPA12BQ96MM6 686 aa18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 FEM1AQ9BSK4 669 aa18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 SEPT11Q9NVA2 429 aaKnown RBP18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 MPP6Q9NZW5 540 aa18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 NEU3Q9UQ49 428 aa18.63■□□□□ 0.57
SSR4P1-202ENST00000429427 CNOT1A5YKK6 2376 aaKnown RBP18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 DCDC2BA2VCK2 349 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 E9PAM4 449 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 FOXD2O60548 495 aaPredicted RBP18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 CLDN11O75508 207 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 SRPRAP08240 638 aaKnown RBP18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 PTPN9P43378 593 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 IRX4P78413 519 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 SLC12A1Q13621 1099 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 CDO1Q16878 200 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 FILIP1LQ4L180 1135 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 WDR59Q6PJI9 974 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 SND1Q7KZF4 910 aaKnown RBP eCLIP18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 ZNF571Q7Z3V5 609 aaPredicted RBP18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 SYT12Q8IV01 421 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 CCDC117Q8IWD4 279 aaPredicted RBP18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 FRS2Q8WU20 508 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 PSMB7Q99436 277 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 RSPH9Q9H1X1 276 aaPredicted RBP18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 FSCN3Q9NQT6 498 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 AIPL1Q9NZN9 384 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 SERGEFQ9UGK8 458 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 CEP192Q8TEP8 1941 aa18.62■□□□□ 0.57
SSR4P1-202ENST00000429427 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 TM4SF5O14894 197 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 SERPINC1P01008 464 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 CALB1P05937 261 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 KRT3P12035 628 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 RRM1P23921 792 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 SDC4P31431 198 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 LIMK1P53667 647 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 CDH4P55283 916 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 RPL7AP62424 266 aaKnown RBP18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 ZNF177Q13360 481 aaPredicted RBP18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 STPG1Q5TH74 334 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 MANEALQ5VSG8 457 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 ACAD10Q6JQN1 1059 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 DGLUCYQ7Z3D6 616 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 FAM124AQ86V42 546 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 MCOLN2Q8IZK6 566 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 CCDC185Q8N715 623 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 PTPRN2Q92932 1015 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 HAPLN3Q96S86 360 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 FAM129BQ96TA1 746 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 GPR174Q9BXC1 333 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 HAUS4Q9H6D7 363 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 EVLQ9UI08 416 aaPredicted RBP18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 SLCO1B1Q9Y6L6 691 aa18.61■□□□□ 0.57
SSR4P1-202ENST00000429427 A0A0D9SEW6 157 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 SIGLEC16A6NMB1 481 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 FAM72CH0Y354 149 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 CDX4O14627 284 aaPredicted RBP18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 MOCS3O95396 460 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 MAOBP27338 520 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 ACSL1P33121 698 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 ADRA1BP35368 520 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 PRKCIP41743 596 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 OGDHQ02218 1023 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 ASIC2Q16515 512 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 TRIM61Q5EBN2 209 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 FAM72AQ5TYM5 149 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 RNF219Q5W0B1 726 aaPredicted RBP18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 FAM72DQ6L9T8 149 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 STRADAQ7RTN6 431 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 TFAP2DQ7Z6R9 452 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 FAM72BQ86X60 149 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 FAM172AQ8WUF8 416 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 RTKNQ9BST9 563 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 EDEM2Q9BV94 578 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 FBRSQ9HAH7 460 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 SUN2Q9UH99 717 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 PAXBP1Q9Y5B6 917 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 PCDH15Q96QU1 1955 aa18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 NYNRINQ9P2P1 1898 aaKnown RBP18.6■□□□□ 0.57
SSR4P1-202ENST00000429427 MED19A0JLT2 244 aaPredicted RBP18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 DDX3XO00571 662 aaKnown RBP eCLIP18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 KHNYNO15037 678 aaKnown RBP18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 CCP110O43303 1012 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 ATMINO43313 823 aaPredicted RBP18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 SNAP91O60641 907 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 SRGAP2O75044 1071 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 MT-CO1P00395 513 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 PTMSP20962 102 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 GPD1P21695 349 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 ST8SIA6P61647 398 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 FIGNQ5HY92 759 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 ZNF776Q68DI1 518 aaPredicted RBP18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 DNAJC24Q6P3W2 148 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 SLC23A3Q6PIS1 610 aa18.59■□□□□ 0.57
SSR4P1-202ENST00000429427 ERMP1Q7Z2K6 904 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms