RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PIGZQ86VD9 579 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 MYLK4Q86YV6 388 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 MYO1HQ8N1T3 1032 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 ICA1LQ8NDH6 482 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 ZNF398Q8TD17 642 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 MFSD3Q96ES6 412 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CNBD2Q96M20 576 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 KCTD15Q96SI1 283 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 AGAP2Q99490 1192 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 APBA2Q99767 749 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 GCOM2Q9BZD3 368 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 C20orf27Q9GZN8 174 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 ASB7Q9H672 318 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 USP29Q9HBJ7 922 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 ANLNQ9NQW6 1124 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CUL9Q8IWT3 2517 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 RFPL1O75677 317 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 GSTA2P09210 222 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CYP2C9P11712 490 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 MYCLP1P12525 358 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 CASP2P42575 452 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 MRPS22P82650 360 aaKnown RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 MRPS5P82675 430 aaKnown RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 STILQ15468 1287 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CNGA3Q16281 694 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 TRMT5Q32P41 509 aaKnown RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 FBXO47Q5MNV8 452 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 ZSCAN18Q8TBC5 510 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 RNF139Q8WU17 664 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 NRG4Q8WWG1 115 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 DPF3Q92784 378 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 DEFB118Q96PH6 123 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 FZD8Q9H461 694 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 IL1RL2Q9HB29 575 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CHST12Q9NRB3 414 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 DTLQ9NZJ0 730 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 CNTN6Q9UQ52 1028 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 EFR3BQ9Y2G0 817 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 EVPLQ92817 2033 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 GAS2O43903 313 aaKnown RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 PEX1O43933 1283 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 KLHL2O95198 593 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 S100BP04271 92 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 FOSL1P15407 271 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 NELFEP18615 380 aaKnown RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 TSPAN8P19075 237 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 GNAZP19086 355 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 ICAM3P32942 547 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 SPRP35270 261 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 CCR10P46092 362 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 TKTL1P51854 596 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 NAGLUP54802 743 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 FCGRTP55899 365 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 FSCBQ5H9T9 825 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 IRGCQ6NXR0 463 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 LCLAT1Q6UWP7 414 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 PDZD4Q76G19 769 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 SNX32Q86XE0 403 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 GDPD5Q8WTR4 605 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 DNAJB3Q8WWF6 145 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 SKA1Q96BD8 255 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 LENG1Q96BZ8 264 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 CMTM5Q96DZ9 223 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 PANX3Q96QZ0 392 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 OXCT2Q9BYC2 517 aaPredicted RBP8.24□□□□□ -1.09
HPS4-205ENST00000429411 KCNK13Q9HB14 408 aa8.24□□□□□ -1.09
HPS4-205ENST00000429411 A0A0A0MRY4 1105 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 KPNA7A9QM74 516 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 BOLA2-SMG1P6H3BVE0 249 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 AMHP03971 560 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 SERPINE1P05121 402 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 MYL3P08590 195 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 BCAT1P54687 386 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 CCNA1P78396 465 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 COG7P83436 770 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 BST2Q10589 180 aaKnown RBP8.23□□□□□ -1.09
HPS4-205ENST00000429411 PDE1CQ14123 709 aaPredicted RBP8.23□□□□□ -1.09
HPS4-205ENST00000429411 LTBP1Q14766 1721 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 PDK1Q15118 436 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 GRIK4Q16099 956 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 CCL14Q16627 93 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 HABP4Q5JVS0 413 aaKnown RBP8.23□□□□□ -1.09
HPS4-205ENST00000429411 SPNS2Q8IVW8 549 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 TDRD5Q8NAT2 981 aaKnown RBP8.23□□□□□ -1.09
HPS4-205ENST00000429411 FAM156AQ8NDB6 213 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 SPATA13Q96N96 652 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 PLEKHA5Q9HAU0 1116 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ITGA11Q9UKX5 1188 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 VANGL2Q9ULK5 521 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 N6AMT1Q9Y5N5 214 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 TRDMT1O14717 391 aaKnown RBP8.23□□□□□ -1.09
HPS4-205ENST00000429411 TPST1O60507 370 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 SIN3BO75182 1162 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ATG7O95352 703 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 PEX2P28328 305 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 IRF9Q00978 393 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 TRIM32Q13049 653 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 MPP3Q13368 585 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms