RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 NPY2RP49146 381 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 RGS7P49802 495 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 BCAT1P54687 386 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 AIF1P55008 147 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 BST2Q10589 180 aaKnown RBP15.56■□□□□ 0.08
C9orf3-204ENST00000424143 PRKAA1Q13131 559 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 GRAMD1BQ3KR37 738 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 INTS6LQ5JSJ4 861 aaKnown RBP15.56■□□□□ 0.08
C9orf3-204ENST00000424143 ZYG11AQ6WRX3 759 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 BNC2Q6ZN30 1099 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-204ENST00000424143 PDZD4Q76G19 769 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-204ENST00000424143 RSPH3Q86UC2 560 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 SCUBE3Q8IX30 993 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 TDRD5Q8NAT2 981 aaKnown RBP15.56■□□□□ 0.08
C9orf3-204ENST00000424143 SHKBP1Q8TBC3 707 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 TRPC4APQ8TEL6 797 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 KBTBD7Q8WVZ9 684 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 DUS3LQ96G46 650 aaKnown RBP15.56■□□□□ 0.08
C9orf3-204ENST00000424143 LENG8Q96PV6 779 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-204ENST00000424143 TSPAN18Q96SJ8 248 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 SLC2A11Q9BYW1 496 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 CASS4Q9NQ75 786 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.56■□□□□ 0.08
C9orf3-204ENST00000424143 PSAT1Q9Y617 370 aa15.56■□□□□ 0.08
C9orf3-204ENST00000424143 NOP56O00567 594 aaKnown RBP15.55■□□□□ 0.08
C9orf3-204ENST00000424143 SOCS7O14512 581 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 NCAM2O15394 837 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 MTSS1O43312 755 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 HSPA1AP0DMV8 641 aaKnown RBP15.55■□□□□ 0.08
C9orf3-204ENST00000424143 HSPA1BP0DMV9 641 aaKnown RBP15.55■□□□□ 0.08
C9orf3-204ENST00000424143 SERPINB5P36952 375 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 DPYSQ14117 519 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 CNGA3Q16281 694 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 SLC9B1Q4ZJI4 515 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 KLHDC8BQ8IXV7 354 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 DSELQ8IZU8 1212 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 ZNF781Q8N8C0 355 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.55■□□□□ 0.08
C9orf3-204ENST00000424143 NT5C3BQ969T7 300 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 LENG1Q96BZ8 264 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-204ENST00000424143 P2RY11Q96G91 374 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 SLC9A7Q96T83 725 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 CYP4F11Q9HBI6 524 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 SYBUQ9NX95 663 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 BFARQ9NZS9 450 aa15.55■□□□□ 0.08
C9orf3-204ENST00000424143 AP2A1O95782 977 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 SLC25A27O95847 323 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 ME2P23368 584 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 PPARGP37231 505 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 MATKP42679 507 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 HCAR3P49019 387 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 RPL14P50914 215 aaKnown RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 ZNF135P52742 658 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 NR1H2P55055 460 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 SESN2P58004 480 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 IFRD2Q12894 506 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 CYLC2Q14093 348 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 LY6KQ17RY6 165 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 DCAF4L1Q3SXM0 396 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 SLC25A52Q3SY17 297 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 PPM1JQ5JR12 505 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 SATL1Q86VE3 508 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 URGCPQ8TCY9 931 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 GATA5Q9BWX5 397 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 UBE2OQ9C0C9 1292 aaKnown RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 EFCAB1Q9HAE3 211 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 NMRAL1Q9HBL8 299 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 RPS6KL1Q9Y6S9 549 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 TNS1Q9HBL0 1735 aaKnown RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 CITO14578 2027 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 A0A096LPK6 155 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 LOC100653049A0A140TA62 436 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 CAPN8A6NHC0 703 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 PSMD3O43242 534 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 KRT34O76011 436 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 CRTAMO95727 393 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 YBX3P16989 372 aaKnown RBP eCLIP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 PMLP29590 882 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 FLOT2Q14254 428 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 ZBTB6Q15916 424 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 HSDL1Q3SXM5 330 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 TCHHL1Q5QJ38 904 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 VWA5B1Q5TIE3 1220 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 LIPMQ5VYY2 423 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 SEL1L3Q68CR1 1132 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 FSTL4Q6MZW2 842 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 KLC3Q6P597 504 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 ZNF410Q86VK4 478 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 TRIM50Q86XT4 487 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 C12orf29Q8N999 325 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 CCDC124Q96CT7 223 aaKnown RBP15.54■□□□□ 0.08
C9orf3-204ENST00000424143 RNPEPQ9H4A4 650 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 ERAP1Q9NZ08 941 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 TRHDEQ9UKU6 1024 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 LZTS1Q9Y250 596 aa15.54■□□□□ 0.08
C9orf3-204ENST00000424143 ZCWPW2A0A1B0GU75 182 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 IRF6O14896 467 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 ADCY6O43306 1168 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 DAB1O75553 588 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms